Gemella sp. oral taxon 928: AXE85_06300
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Entry
AXE85_06300 CDS
T04256
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
got
Gemella sp. oral taxon 928
Pathway
got03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
got00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AXE85_06300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
got03019
]
AXE85_06300
03016 Transfer RNA biogenesis [BR:
got03016
]
AXE85_06300
Enzymes [BR:
got01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AXE85_06300
Messenger RNA biogenesis [BR:
got03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AXE85_06300
Transfer RNA biogenesis [BR:
got03016
]
Prokaryotic type
tRNA degradation factors
AXE85_06300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
KH-I_KHDC4-BBP
Spt6_S1
S1_RRP5
S1_2
NtA
Motif
Other DBs
NCBI-ProteinID:
AME09794
LinkDB
All DBs
Position
complement(1360348..1362435)
Genome browser
AA seq
695 aa
AA seq
DB search
MFQEKKIYTTQWAGKRLTVELGEMAKQANAAVVVKYGDTVVLTTAVASKEAKDVDFFPLT
VNYEEKMYAVGKIPGGFLRREGRPGTEATLAARLIDRPIRPLFEDGFRNEVQVISTVLSV
EYDSDPVMAAMLGSSLALSVSNIPFKGPIAGVTVGFINGEYIINPSVEQLEKSEIDLKVA
GTIEAINMVEAGAKEVSEEVMLNAIMFGHEEIKRLITFQQKIVNEIGQEKMEIELKVIDE
TIYNEVLELALTDMKTSIAIKDKQERDEAINSVKERVTVIFEERVSDEDELDIVKEAKLS
LDKIVKDEVRREITEDKVRPDGRALTEIRPLASRIDVLPRTHGSALFTRGQTQSLGVVTL
GNISDEQIIDDLTQEENKRFMLHYNFPAFSVGEVGFSRAPGRREIGHGALGERALSQVIP
SKEDFPYTIRVVSEILESNGSSSQATICSGSMALMAAGVPIKSQVAGIAMGLVKKDEHYT
ILTDIQGMEDHLGDMDFKVAGTAEGITALQMDIKIDGLSEQILKESLEQARIGRLQILAH
MNEVISEPRQDVSVYAPKIKIIKIKPEKIKDVIGSGGKVINEIIEQTGVKIDIEQTGEVF
ISSPDLEQINKAIDIIENIVREAEVGEIYLAEVKRIEKFGAFVELFPGVDALVHISKLAK
ERVNKVEDVVKIGDTLKVKVIKIDEKGRVDATANF
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagagaaaaaaatttatacaactcaatgggcagggaaacgattaactgtggag
ttaggtgagatggcgaagcaagctaatgcagcagtagtagttaaatatggggatactgtt
gtattaacgacagcggttgcttctaaagaagcaaaagatgtagatttctttccgttaaca
gtaaactatgaagagaaaatgtatgctgtcggaaaaattccgggcggttttttaagacgt
gaaggacgtccggggacagaggcgacgttggcggcacgtttgattgatagaccgattaga
ccattgtttgaagatggttttagaaatgaagtacaggttatttcaacagtcttgtcagta
gagtatgatagtgatccggtaatggcagcaatgttaggcagctcattagcattatcagta
tctaatattccgtttaaaggacctatagccggtgttactgttggatttataaatggagaa
tatataattaatccaagtgttgaacaacttgaaaaatcagaaatagatttaaaagtagcc
ggaacaatagaagcaattaacatggttgaagccggagcaaaagaggtatcggaagaagta
atgttaaatgctattatgtttggacatgaagaaattaaacgtcttattactttccaacag
aaaattgttaacgaaattggtcaagaaaaaatggaaattgagctgaaagtcattgatgaa
actatttataatgaagtgttggaacttgcactaaccgatatgaaaacttcaatagcaata
aaggacaaacaagaacgtgatgaagctattaattctgtaaaagaaagagtaacagtgata
tttgaagaacgtgtaagcgatgaagatgaactagatatagttaaagaagcaaaactttca
ttagataagattgtaaaagatgaagttcgtcgtgaaataactgaagataaagtaagacct
gacgggcgagctttaacggaaataagaccactggcatcacgtattgatgtattaccgaga
actcatggatcagccttatttactcgtggacaaacgcaatcgttaggtgtcgttacgcta
ggcaatatatctgacgaacaaataattgacgatttgacacaagaagaaaataaacgtttt
atgcttcattataattttccggcattttctgtaggtgaagtagggttcagtcgtgcgcct
ggccgtcgtgagataggacatggtgcattaggtgaacgtgcattatcacaggttataccg
tcaaaagaagattttccttatacaattcgtgttgtatcggaaattttggaatcaaacggt
tcaagttcgcaagcaacaatttgttcagggtctatggcacttatggcagcaggggttcca
attaaatcacaagtagccggtatagccatgggacttgtaaaaaaagatgaacattatact
attttaacggatattcaaggtatggaagatcatcttggagatatggactttaaagtagcc
gggacagcagaaggtataacagcacttcaaatggatataaaaattgatgggcttagtgag
caaatattaaaagaatctttggagcaagcccgtataggaagacttcaaattctagcacac
atgaatgaagtaatttctgaaccacgtcaagatgtttcagtatatgcaccaaaaattaaa
attattaaaattaaacctgaaaaaattaaagatgttataggttccggcggtaaggttatt
aatgaaattattgaacaaacaggtgttaaaattgatattgaacagacgggagaagtattt
atttcatcaccggatttggagcaaattaataaagcaatagatattattgaaaatatagta
agagaagcagaagtaggggaaatttatttagcggaagtaaaacgtattgaaaaattcggc
gcttttgttgagttattccccggtgtcgacgcccttgtacatatttcgaaattagctaaa
gaacgtgtaaataaagtggaagatgttgtaaaaatcggtgatactttaaaagttaaagtt
ataaaaattgacgaaaaaggtcgtgtcgatgccactgctaatttctag
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