Gemella sp. oral taxon 928: AXE85_07575
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Entry
AXE85_07575 CDS
T04256
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
got
Gemella sp. oral taxon 928
Pathway
got03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
got00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AXE85_07575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
got03400
]
AXE85_07575
Enzymes [BR:
got01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AXE85_07575
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AXE85_07575
DNA repair and recombination proteins [BR:
got03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AXE85_07575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Ribosomal_L37ae
Motif
Other DBs
NCBI-ProteinID:
AME10012
LinkDB
All DBs
Position
complement(1632069..1632929)
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AA seq
286 aa
AA seq
DB search
MPELPEVENIKFGLENKLKEKKIIEVTFSEVVQNGHSTGKQTIVKQDLLEFRKNIVKKTI
YNVVRRGKYLYFILDKGYLIIHFGMTGAFFVVKDVREIDNKNYYKHRHVIFNLNTGEKLV
FSDIRRFGELRYIDDITTFKPFNNLAPEPFDLGTEQYFISKLNEKKYKEQSIKALLLDGN
VFCGCGNIYDCEVLYRRKIHPLTTADKLSLSDKKGLFRELVNILAFAIKEGGSTISDYVH
TDGGEGNMQNFHQIYGKKNCPIGHNVEKIEIKGRASYFCPICQKRK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattaccagaagttgaaaatataaaatttggtttagaaaacaaattaaaagaa
aagaaaattattgaagtaactttttccgaagttgtacaaaatggtcattctaccggtaag
caaacaatagtaaagcaagatttattggaatttagaaaaaatattgtaaaaaaaactatt
tataacgttgtacgccgagggaaatatttatattttattttagataaagggtatcttatt
atccatttcggaatgacgggagctttttttgtagtaaaggacgtaagggaaatagataat
aagaattattataaacatcgacatgttatttttaatctaaataccggagaaaagttggtg
tttagtgatattcgtcgttttggagagttaaggtatatagatgatattacaacatttaaa
ccttttaacaatctagcgccggaaccgtttgatttaggaactgaacaatattttatatct
aaattgaatgagaaaaaatataaagaacaatcgataaaagcactgcttcttgacgggaat
gttttttgcggttgtggtaatatttatgattgtgaagtgctatatagaagaaaaattcat
ccgttaactacagctgataaacttagtttatcagataagaaaggattatttagagaatta
gttaatattttagcgtttgcgattaaagaaggtggctcaacaatttctgattatgttcat
actgacggtggagaaggaaatatgcaaaattttcatcaaatatatggtaaaaagaattgt
cctataggtcataatgttgagaagatagaaataaaaggtagagcgagttatttttgtccg
atttgtcagaaaagaaaataa
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