Gluconobacter oxydans 621H: GOX0076
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Entry
GOX0076 CDS
T00230
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
gox
Gluconobacter oxydans 621H
Pathway
gox03030
DNA replication
gox03430
Mismatch repair
gox03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GOX0076
03430 Mismatch repair
GOX0076
03440 Homologous recombination
GOX0076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gox03032
]
GOX0076
03400 DNA repair and recombination proteins [BR:
gox03400
]
GOX0076
Enzymes [BR:
gox01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GOX0076
DNA replication proteins [BR:
gox03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GOX0076
DNA repair and recombination proteins [BR:
gox03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GOX0076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AAW59873
UniProt:
Q5FUV6
LinkDB
All DBs
Position
complement(88604..92026)
Genome browser
AA seq
1140 aa
AA seq
DB search
MSHADFVHLRNHSAYSLSQGAIRIPELVSLAAKNGMPAVALTDSGNLFGALEFSLYCRSN
GVQPIVGCQISLPPRSTKPGAMSEPLVVLARNEEGLANLQILSSEGFLNGDPADPSVAVD
FLCQHAAGLFLLTGGNRGPINKLILEEQKSEAQALLSRLEEAFRGNIAVELNRFGEAGEQ
EVESVLIPMADQMDIPLVATNECFFPKPEMHEAHDALLCIAQGRTIAEEDRWHVSPQAWF
KTPAEMRAVFHDLPEACDNTLIIAQKCAVAACTRKPLLPICPKVREGSTEEETLRAMAWE
GLEKRLDAINAGEEKRKLYSERLQVELDIIARMGFPGYFLIVADFIQWAKAHDIPVGPGR
GSGAGSLVAYALTITDIDPIPFGLLFERFLNPERVSMPDFDIDFCQDRRDEVIRYVREEY
GGSRVAQIITFGKLQAKAAVRDVGRVLGLPYGMVNRVAELIPNNPAKPVSLSDAIEGEPR
LQEMRDSDESLKRLMEIALQLEGLYRHASTHAAGVVIGDRELVELVPLYRDPKSDMLVTQ
YNMKYVEQAGLVKFDFLGLTTLTILKRGLDFLKEQGITVDLSRIPLDDAKTFEMLAKGDT
AGVFQFEGAGMRDMLKQMAASRLEDLIAGVSLYRPGPMANIPDYCRRKHGEPWEPPHEEI
RDILEETYGIMVYQEQVMQIAQKMAGYSLGGADLLRRAMGKKIAAEMEKQRAIFTEGATA
RGIPQEKAVEVFDLMARFADYGFNKSHAAAYALVSYQTAWMKANHPVAFLAGCMSLAREK
TDKLAALCQEARRMNIPVLPVDINKSLADFSIETLEDGRQGIRYALSAIKRVGAAAMQSV
VACRGDRPFQDLTDFAERCDPKSLNKIQLESLAKAGAFDSLLKERHIVFSSADILLRRAQ
ARAQEQQMGQAGLFGGAGQEREILRLNEGRPWPDFERLSLEASAIGFHMSAHPLDAYRSV
LRRLGVTPSNALENAAKTGTTRVKIAGCVVDRKERPTRTGKKMAWVNLSDSGGGCEVTLF
SETLTSCRDLLVAGQAILVTAELKVDGDALRITAQNVMDLEVAAAAERSEIRVWLKEDAS
LPDLASLLEEVQGGLGRVKLLPSVEETQDVEISIPGHYRVTPRLAERLRTLRGVEKALQV
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatgccgattttgttcatctcagaaatcattccgcgtactccctgagtcagggc
gcaatccggattccggagcttgtgagcctggcagccaagaatggcatgccggccgtcgcc
ctgacggatagcggcaatctgttcggtgcgcttgagttctcgctgtactgtcgcagcaat
ggtgttcagccgattgtcggctgccagatttcactccccccgcgcagcacaaaacccgga
gcgatgtccgagccgctagtggttctggcgcggaatgaggaaggactggcaaatctccag
atcctgtcgtctgaaggatttctgaacggcgatccggctgatccttcggttgcggtcgac
tttctgtgtcagcatgcggcgggactgtttctgctgacgggcggcaatcgcgggccgatc
aacaagctgatccttgaagaacagaaatctgaggcgcaggcccttctgagccgtctggaa
gaagctttccggggaaatatcgcggttgagttgaaccggttcggagaggcaggggagcag
gaagtcgaaagtgttctgatcccgatggcggatcagatggatattcccttggtcgccacc
aatgaatgctttttccccaagcctgaaatgcatgaggcccatgatgcgctgctgtgtatc
gcgcagggccgcactattgcggaagaagaccgctggcatgtctctccgcaggcttggttc
aagacgcctgcggaaatgcgggctgtctttcatgatcttccggaagcctgtgacaacacg
ctgatcattgcgcaaaaatgtgcggtggcggcctgcacgcgcaagccgctactgccgatt
tgtcccaaggtccgcgaaggctcgacggaagaggaaacgcttcgggccatggcctgggaa
gggctggaaaagcgtcttgacgcgatcaatgcgggtgaagagaagcgcaagctttattcc
gagcgccttcaggtggagctcgatatcatcgcgcggatgggcttcccgggctacttcctg
attgttgccgacttcattcagtgggccaaggcgcatgatattccggtcgggccagggcgt
ggatcgggtgcaggctcgctggtggcgtatgcgctgacgattacggatatcgatcccatt
ccgttcggactgctgttcgagcgattcctgaatcctgagcgtgtttccatgccggatttc
gatatcgatttctgtcaggaccgccgcgatgaagtgatccggtatgtgcgcgaagaatat
ggcggaagccgtgtcgcgcagatcatcacgttcggaaagcttcaggccaaggccgctgtg
cgggacgtcggtcgtgtgctgggattgccttatgggatggtcaaccgcgtcgcagaactg
atcccgaacaatccagccaagcctgtttcgctgtcagacgcgattgagggtgaaccacgg
cttcaggaaatgcgggacagcgatgagtcgctcaagcgtctcatggaaatcgcgttgcag
cttgaaggtctgtaccgtcatgcatctacccatgccgcgggtgtggtgatcggtgatcgc
gaactggtagagttggtgccgctgtatcgcgatccgaagagcgacatgctcgtgacgcag
tacaacatgaaatatgtcgagcaggctggactggtgaagtttgacttcctcggcctgaca
acgctcaccattctcaagcggggcctggatttccttaaagaacaggggattacggttgat
ctctcacgtattcctctggatgatgcgaagacgttcgagatgctggccaaaggcgatacg
gccggcgtgttccagttcgaaggcgccggcatgcgggacatgctcaagcagatggcggcc
agtcggctggaggatctgattgcgggcgtgtcgctgtatcgtcccggaccgatggcaaac
atcccggattattgtcgccgcaagcatggcgagccttgggagccgcctcacgaggaaatc
cgcgatattcttgaagagacctatgggatcatggtctatcaggaacaggtcatgcagatc
gcccagaagatggcgggctacagtctgggtggtgcggatctgctgcggcgtgcgatgggc
aagaagatcgcagcggaaatggagaagcagcgcgcgatcttcaccgagggggcaacagcg
cgtggcatccctcaggaaaaagcggtcgaagtctttgatcttatggctcgttttgcggat
tatggctttaacaagtcgcatgccgcagcctatgcgctcgtgtcctatcagacagcctgg
atgaaggcgaaccatccggtcgcgttcctcgcgggctgcatgtctctggcacgggaaaag
acggacaagctggcggctttgtgtcaggaagcacggcgaatgaatattcccgtgttaccc
gttgatattaataaatctttggcagatttttctattgaaacgctggaagacgggcgtcag
gggatccgttatgcgttgtcggccatcaaacgtgtgggcgcggccgcgatgcagagtgtc
gtggcttgccgtggggacagaccgtttcaggatcttacggattttgcggagcgctgtgat
ccgaagagtctgaacaagattcaattggaaagtcttgcaaaagcaggggctttcgacagt
cttctcaaagaacgacatatcgttttttcgagtgccgacattctgttgcgtcgggcgcag
gcgcgggcccaggagcagcagatgggtcaggctggacttttcgggggggcgggtcaggaa
cgtgagattctgcgcctgaacgaaggtcgcccctggcccgactttgaacgtctctcgctg
gaagcttcggctatcgggtttcacatgagtgcacatcctttggatgcgtatcgcagcgtc
ctgaggcggctgggtgtaacgccatccaatgcgctggaaaatgctgcaaaaacagggact
acgcgcgtcaagatcgcaggctgtgttgtggatcgtaaggagcggccgacacggaccggc
aagaaaatggcctgggtcaatctgtccgatagtggtggcggatgtgaggtcacgctgttt
tccgagacgctgacatcctgccgggatctgctggtggcgggacaggccatcctggtgacg
gcggaactcaaggtggatggcgatgcgctgcggatcacagctcagaatgtcatggatctg
gaggtcgcggctgcggccgagcgttcggaaatccgcgtctggctgaaggaggatgcgtcc
ctgccggatctggcttctctgctggaagaggttcagggcggcttggggcgtgtgaagctg
ctgccttccgtggaggagacgcaggatgtcgaaatctccattccgggacattaccgggtg
acgccacgtcttgcggagcggctgcggacattgcggggggttgagaaggccttacaggtc
tga
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