Gluconobacter oxydans 621H: GOX0200
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Entry
GOX0200 CDS
T00230
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
gox
Gluconobacter oxydans 621H
Pathway
gox03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gox00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GOX0200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gox03019
]
GOX0200
Enzymes [BR:
gox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GOX0200
Messenger RNA biogenesis [BR:
gox03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GOX0200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25_NTPase-like
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AAW59989
UniProt:
Q5FUF7
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All DBs
Position
complement(213871..215166)
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AA seq
431 aa
AA seq
DB search
MTSFAELKLAEPIQKALAEEGYTTPTPIQAGAIPYLLEGRDLLGLAQTGTGKTAAFALPI
LNHIFTNRRPAPPKGVRALVLAPTRELASQIGESFAAYARHMKFSYAVVFGGVGQGRQIE
TTRRGVDVLVAAPGRLLDLIGQKHIDLSTLEILVLDEADRMLDMGFVRDIQRIMALLPKQ
RQTLLFSATMPPSISDLAHSLLKNPATVQVTPESSTVDRINQAVMFVDSGSKKDAALMLL
ESPSVARAVVFTLMKHEANKVAEFLNKNGIRAEAIHGNKSQGARERAMAGFRSGAIKALV
ATDIAARGIDVDEVSHVFNYDLPNVPESYVHRIGRTARAGREGCAVSLCDAEQRAWLKDI
EKKIGKPIPVVTDHPFHSEEARLSTQRPPVLGGGRGGGGGGRRRSGPPSGGRPGGGRGGA
PGRGGPRPGAR
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtttcgccgaactcaagcttgccgagccaattcagaaggctctcgcggaagaa
ggctacaccacgccgaccccgattcaggcaggtgccatcccttatctgctcgaaggtcgc
gatcttctcggtctggcccagaccggaaccggcaagacggcagcattcgcgcttcccatc
ctgaaccatatcttcacgaatcgtcgccctgcgccgccgaagggcgtccgtgccttggtt
cttgcgcccacgcgtgaactggcgtcgcagatcggtgagagctttgccgcttatgcgcga
cacatgaagttctcctatgctgtcgtgttcggtggggtcgggcagggacgccagatcgag
accacccgtcgcggtgtggacgtcctcgtggccgcgcccggccgtctgcttgatctgatc
gggcagaaacatatcgatctctccactctggaaatcctcgttctcgatgaggccgaccgg
atgctggacatgggcttcgtgcgcgatatccagcgcatcatggccctgcttcccaagcag
cgtcagaccctgctgttttcggcaaccatgccgccgtccatcagcgatctggcccattcg
cttctgaagaacccggcaacggttcaggtcacgcctgaatcgagcacggttgatcgcatc
aatcaggctgtcatgttcgttgactcgggcagcaagaaagatgcggctctcatgctgctg
gaaagcccgagcgttgcccgggctgtggttttcacgctgatgaagcatgaagccaacaag
gttgccgagttcctgaacaagaacgggatccgcgcggaagccatccacggcaacaagtcc
cagggtgcccgtgagcgcgctatggccggtttccgcagtggcgccatcaaggctctggtg
gcaaccgacatcgcggcccgcggtatcgacgtggacgaggtcagccacgtcttcaattac
gatctgccgaatgtaccggaatcctacgttcaccgtatcggccgtacggcccgggcaggg
cgtgagggttgcgcagtctccctgtgtgacgctgaacagcgcgcatggctcaaggatatt
gagaagaagatcggcaagcccattccggttgtaacggatcatcccttccattccgaagag
gctcgactgtccacgcagcgtccgccggttctgggcggtggtcgtggtggcggcggtggc
ggacgccgtcgctcgggaccgccctcgggtggtcgcccaggtggcggccgtggtggcgcc
ccgggtcgtggtggtccccgcccaggcgcgcgctga
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