Gluconobacter oxydans 621H: GOX0385
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Entry
GOX0385 CDS
T00230
Name
(GenBank) DNA-directed RNA polymerase beta' chain
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
gox
Gluconobacter oxydans 621H
Pathway
gox03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gox00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GOX0385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gox03021
]
GOX0385
03400 DNA repair and recombination proteins [BR:
gox03400
]
GOX0385
Enzymes [BR:
gox01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GOX0385
Transcription machinery [BR:
gox03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GOX0385
DNA repair and recombination proteins [BR:
gox03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GOX0385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Apocytochr_F_C
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
AAW60168
UniProt:
Q5FTX8
LinkDB
All DBs
Position
complement(397492..401811)
Genome browser
AA seq
1439 aa
AA seq
DB search
MNELMKILGQTGQSVTFDQIKIQLASSEQVRSWSYGEIKKPETINYRTFKPERDGLFCAR
IFGPIKDYECLCGKYKRMKFRGIVCEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSL
PSRIATMLDLPLKDVEPVLYFEKFLVLDKGVCESDQIDSYKNGKKRDQYLLDEIRCEDLL
DEYPDAGIDVGIGAEAIKRALSSYDWGIPNDQERELSLAAKEKGLPDPFDYDADVMEGDS
EKTMMRKKLRKATSEAARKKLVKRLKLVEAFVESGSRPDWMIMDIVPVIPPELRPLVPLD
GGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKRMLQEAVDALFDNGRRGRAI
TGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPKKMALEL
FKPFIYSKLEKYGHATTIKAAKRMVEKERPEVWDILEEVIREHPVMLNRAPTLHRLGIQA
FEPTLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNILSPANG
KPIIVPSQDIVLGLYYLSLEVPEYRETPDEAVIKDGKIVTAAPPAYSDVAEIESAMLSGS
LKLHDKIRLRLPTIDAEGKSVRQTILTTPGRALIAQILPKHQAIPFSLVNKQLTKKNVSD
VIDTVYRHCGQKEAVIFCDRLMGLGFRHAARAGISFGKDDMIIPEAKATLVGKTSEEVKE
FEQQYQDGLITAGERYNKVVDAWSRCTDEVQAAMLKEISKQVIGKPTNSVWMMSHSGARG
SPAQMKQLAGMRGLMVKPSGEIIEQPIIANFKEGLSVLDYFTSSHGARKGLADTALKTAN
SGYLTRRLVDVAQDCIIVEPDCGTERGLTVRAVMDSGEVVASLSERILGRTLSKDVIHPV
TQDVILPRNTLIEEAEAELIEKAGVESVDIRSVLTCDSRVGICAHCYGRDLARGTPVNIG
EAVGVIAAQSIGEPGTQLTMRTFHIGGAATRGAEQSMVEASRDGIVTIKNRNVVENSQKV
LVVMSRNCEILLTDENGVERARYRVPYGARLMVSEGEAVTRTQKMAEWDPYTLPIITEQA
GTVEYLDLIDSITLVERMDEVTGLSSKVVVDYKQAAKGVDLRPRLQLKDASGNVVKLANG
NDARYFLSPDSILSVENGAEVNAGDVLARIPREGSKTRDITGGLPRVAELFEARRPKDHA
IIAEGEGRIEFGKDYKSKRCVIVKNDDTGEETQYLIPKGKHVSVQEGDFVQKGDPLVDGP
RVPHDILKVMGVEALSDYLVNEIQDVYRLQGVKINDKHIEVIVRQMLQKVEILEPGDSTY
LIGETVDRIEYEGENQRLMENGDTPAKAMPVLQGITKASLQTQSFISAASFQETTRVLTD
AATSGKVDTLNGLKENVIVGRLIPAGTGSVMNRLRSIAASQDRQRVGGASPKAVEDAAE
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaactcatgaagatcctgggtcagaccggccagtcggtgaccttcgaccagatc
aagatccagctcgcctccagcgagcaggtgcggtcgtggtcttacggcgaaatcaagaag
ccggagaccatcaactaccggacgttcaagcctgagcgtgacggtctgttctgtgctcgt
atctttggcccgatcaaggattacgagtgcctctgcggcaagtacaagcggatgaagttc
cgcggtattgtctgcgaaaagtgcggtgtggaagtcacgctggccaaggtgcgccgtgag
cgcatgggccatatcgagctggcgtccccggttgcacatatctggttcctgaagtccctg
ccgagccgcatcgccacgatgctggatctgccgctcaaggacgtcgagccggttctgtat
ttcgagaagttcctggtgctcgacaagggcgtctgtgaatccgatcagatcgactcgtac
aagaatggcaagaagcgcgaccagtacctgctggacgaaatccgctgcgaagacctgctg
gatgaatatccggatgcaggcatcgatgtcggaatcggtgcggaagccatcaagcgcgcg
ctgtccagctatgactggggtattccgaacgaccaggaacgtgagctgagccttgcggca
aaggaaaagggcctgccggatccgttcgactatgacgctgacgtcatggaaggcgattcc
gagaagaccatgatgcgcaagaagctgcgcaaggcgacctcggaagccgcgcgcaagaag
ctcgtgaagcgtctgaagctggttgaagccttcgtggaaagcggctcgcgtccggactgg
atgatcatggacatcgttccggtcattccgccagaactgcgtccgctggtgccgctggac
ggcggtcgtttcgcgacgtctgatctgaacgacctgtatcgccgtgttatcaaccgtaac
aaccgtttgaagcggctgatcgagctgcgtgcgccggacatcattgtccgcaacgaaaag
cgcatgctgcaggaagctgttgacgccctgttcgacaacggccgtcgtggccgcgccatc
acgggtgccaacaagcgtccgctgaagtcgctgtccgacatgttgaagggcaagcagggc
cgcttccgtcagaacctgctcggaaagcgcgtcgactattccggccgttcggtcatcgtg
gtcggtccggaactgaagctgcatcagtgtggtcttccgaagaagatggcgctcgagctg
ttcaagccgttcatctactcgaagctcgagaagtacggtcacgccaccaccatcaaggct
gcaaagcgcatggtggagaaggagcgtccggaagtctgggatatccttgaagaggtgatc
cgcgagcatccggtcatgctgaaccgtgcgccgacgcttcaccgtctgggtatccaggcg
ttcgagccgacgctgatcgaaggtaaggccatccagcttcacccgctggtctgcaccgcg
ttcaacgctgacttcgacggtgaccagatggccgttcacgtgccgctgtcgcttgaagcc
cagcttgaagcccgcgtgctgatgatgtccacgaacaacatcctcagccccgcgaacggc
aagccgatcatcgtgccgtcccaggatatcgttctgggtttgtattacctgagccttgag
gttccggaataccgcgagacgcctgacgaagccgtcatcaaggatggcaagatcgtcacg
gcagctccgccggcctattcggatgtcgccgaaatcgagagcgccatgctttcgggctcg
ctgaagctgcatgacaagatccgtctgcgtctgccgacgatcgatgcagagggcaagtcg
gtccgtcagacgatcctgacgacgccgggtcgtgcgctgattgcgcagatcctgccgaag
caccaggccattcctttcagcctggtcaacaagcagctgacgaagaagaacgtgtccgac
gtgatcgacacggtctatcgtcactgtggtcagaaggaagccgtgattttctgtgaccgc
ctgatggggcttggtttccgtcatgcagcccgcgccggcatttccttcggcaaggatgac
atgatcattccggaagccaaggcaacgctggttggcaagacgtcggaagaggtcaaggaa
ttcgagcagcagtatcaggacggtctgatcacggctggcgagcgttacaacaaggtggtt
gatgcctggtcacgctgcacggacgaagtccaggcggcgatgctcaaggaaatctccaaa
caggtcatcggcaagccgacgaactcggtctggatgatgagccactcgggtgcccgtggg
tcgccggcccagatgaagcagctcgccggtatgcgcggtctgatggtgaagccttcgggc
gagatcatcgaacagccgattatcgcgaacttcaaggaaggcctgtcggttctcgattac
ttcacctccagccacggtgcccgtaagggcctcgcggatacggcgctgaagaccgcaaac
tcgggttatctgacgcgtcgtctcgtcgacgtggcgcaggactgcatcattgtcgagccg
gattgcggtacggagcgtggcctgacagtccgtgcggtcatggatagcggcgaagtcgtt
gcttccctgtccgagcgtatcctgggtcgtaccctgtccaaggatgtgatccatccggtg
acgcaggatgtcatcctgccgcgcaacacgctgatcgaagaagccgaggccgagctcatc
gagaaggctggcgtggaaagcgtcgatatccgctctgtcctgacctgtgacagccgcgtc
ggtatctgtgctcactgctacggccgtgatctggcccgcggtacgccggtcaatatcggt
gaggctgtcggtgtcatcgctgcccagtccatcggtgagccgggcacccagctgacgatg
cgtaccttccatattggtggtgcggcaacgcgtggcgccgagcagtccatggttgaagcg
tcccgcgacggtatcgtgacgatcaagaaccgcaacgtcgtcgagaactcgcagaaggtt
ctggtcgtgatgtcgcgtaactgcgagatcctgctgactgacgaaaacggtgtggaacgt
gcccgctaccgtgtgccttacggcgcacgtctgatggtctcggaaggcgaagcggtgacg
cggacccagaagatggccgagtgggacccgtacaccctgccgatcattaccgagcaggct
ggtaccgtcgagtatctcgacctgatcgacagcatcacgcttgttgagcgcatggatgaa
gtcacgggtctgagctcgaaggtcgtcgttgactacaagcaggcagccaagggtgtggat
cttcgtccgcgtctgcagctcaaggatgcttccggcaacgtcgtcaagctcgccaatggc
aatgacgcccgctacttcctctctccggacagtattctgtctgtggagaacggagcagag
gtcaatgccggtgacgtgctggcccgtattcctcgcgaagggtccaagacgcgtgacatt
acgggtggtctgccgcgtgtggcagaactattcgaggcacgtcgtccgaaggatcatgcg
atcatcgccgaaggcgagggccgcattgagttcgggaaggactacaagtccaagcgctgc
gtcatcgtcaagaacgacgatacgggtgaagagacccagtacctcatcccgaagggcaag
cacgtttccgttcaggaaggcgactttgtccagaagggcgatccgctggtcgacggtccg
cgcgtgccgcatgacattctcaaggtcatgggtgtcgaggccctgtccgactatctcgtc
aacgagatccaggacgtctatcgactgcagggcgtgaagatcaatgacaagcacatcgaa
gtcattgtccgtcagatgctgcagaaggtggaaatccttgagccgggtgactcgacctac
ctgatcggcgagacggtagaccgtatcgagtacgagggtgaaaaccagcgtctcatggag
aacggggatacgcctgcaaaggccatgccggttctgcagggtatcaccaaggcgtctctg
cagacgcagtccttcatctcggcggcctccttccaggagaccacacgtgtcctcacggat
gcggcgacgtcgggtaaggtggataccctcaatggtctgaaggagaacgtgattgtcggg
cgtctgatcccggcaggaacgggcagtgtgatgaaccgcctgcggagtatcgctgccagc
caggaccgtcagcgcgtcggtggagcatctccgaaagccgtcgaagacgcagcggaatga
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