Gluconobacter oxydans 621H: GOX0625
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Entry
GOX0625 CDS
T00230
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
gox
Gluconobacter oxydans 621H
Brite
KEGG Orthology (KO) [BR:
gox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gox03016
]
GOX0625
Enzymes [BR:
gox01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
GOX0625
Transfer RNA biogenesis [BR:
gox03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GOX0625
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AAW60402
UniProt:
Q5FT94
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All DBs
Position
complement(666236..667426)
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AA seq
396 aa
AA seq
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MRSKAPTFPTPVLLTSSEEVARICEKLQNEPFVTIDTEFVRERTYWPELCLVQLAGTEDV
VLIDTLAPGIDLAPLGALLAKPDCTKVFHAARQDLEIFLHIFDRLPASVFDTQVAAMVAG
FGDQVGYDSLVGAITGRSIDKAHRFSDWSARPLSKAQIAYAATDVTHLRTVYDALRKQLA
EQDRLHWADSEQAILTEEKTFRPDPRRLWEKLKARTSNRRMLGILREVTAWREQEAQNAD
IPRQRVIRDESLLEIAAVHPDTVEALSRIRGVTRGFAEGKMGKGLLEAIRIAQELPESEL
PKAPSKSDRPRPSTALVALLRVLLAAKCEQHKVAPRLVASSDDLDLIALGETDVGALKGW
RRELFGLDAQALVRGEIALAVVDGLVELQRVAEPAS
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcgaaagctccgaccttcccgacccccgttctcctgacctccagtgaggaggtg
gcccgtatctgcgaaaaactgcagaacgagcctttcgtgaccatcgacacggaattcgtc
cgggaacggacctactggcccgagctctgtctcgtgcagcttgccggaaccgaagacgtg
gtcctgatcgacacgctggcacccggcattgatcttgcccctctcggcgctcttctggcc
aaaccggattgcaccaaggtctttcatgccgcccggcaggatcttgagattttccttcat
attttcgaccgccttccggcttcggttttcgatacgcaggttgctgccatggtggccggc
ttcggcgatcaggttggctatgacagtctggtcggcgcgattaccggtcgcagcatcgac
aaggcgcaccgcttcagtgactggtcggcccgtccgctgagcaaggcgcagatcgcttac
gccgcgactgatgtcacgcatctgcgcacggtttacgatgccctgcgcaaacagcttgcc
gaacaggaccgtctgcactgggccgactccgaacaggctatcctgacggaagaaaagacc
ttccgtcctgatccccgtcgcctgtgggaaaagctgaaagcccggaccagcaaccggaga
atgcttggtatcctgcgcgaagtcacggcctggcgtgaacaggaagcccagaacgccgat
atcccccgtcagcgtgtcatccgtgatgaaagcctcttggaaatcgccgccgttcatccc
gatacggtcgaggctctctcccgcatccgaggggtgacccggggttttgccgaaggcaag
atgggcaaaggccttctcgaagcaatccgtatcgcgcaggagttgcctgagtccgaactt
cccaaagccccttcgaaatccgatcgcccccggccgtccacagccctcgtggcgcttctg
cgggtgctgctggccgccaagtgcgagcagcataaggtggccccccgcctggtggcttct
tcggacgatctggatctgattgcgcttggtgaaaccgatgtcggcgcgctgaagggctgg
cgtcgcgaacttttcggtctggatgcccaggcgctggtccgtggcgaaatcgcgctggcc
gtcgtggacggccttgtggagcttcagcgggtcgccgaaccggcctcgtaa
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