Gluconobacter oxydans DSM 3504: GLS_c00800
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Entry
GLS_c00800 CDS
T03563
Symbol
dnaE
Name
(GenBank) DNA polymerase 3 subunit alpha DnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
goy
Gluconobacter oxydans DSM 3504
Pathway
goy03030
DNA replication
goy03430
Mismatch repair
goy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
goy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GLS_c00800 (dnaE)
03430 Mismatch repair
GLS_c00800 (dnaE)
03440 Homologous recombination
GLS_c00800 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
goy03032
]
GLS_c00800 (dnaE)
03400 DNA repair and recombination proteins [BR:
goy03400
]
GLS_c00800 (dnaE)
Enzymes [BR:
goy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GLS_c00800 (dnaE)
DNA replication proteins [BR:
goy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GLS_c00800 (dnaE)
DNA repair and recombination proteins [BR:
goy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GLS_c00800 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AHK70013
UniProt:
A0A067Z167
LinkDB
All DBs
Position
complement(88589..91768)
Genome browser
AA seq
1059 aa
AA seq
DB search
MSEPLVVLARNEEGLANLQILSSEGFLNGDPADPSVAVDFLCQHAAGLFLLTGGNRGPIN
KLILEEQKSDAQALLSRLEEAFRGNIAVELNRLGEVGEQEVESVLIPMADQMDIPLVATN
ECFFPKPEMHEAHDALLCIAQGRTIAEEDRWHVSPQAWFKTPAEMRAVFHDLPEACDNTL
IIAQKCAVAACTRKPLLPICPKVREGSTEEETLRAMAWEGLEKRLEAINADEEKRKLYSE
RLQVELDIIARMGFPGYFLIVADFIQWAKAHDIPVGPGRGSGAGSLVAYALTITDIDPIP
FGLLFERFLNPERVSMPDFDIDFCQDRRDEVIRYVREEYGGSRVAQIITFGKLQAKAAVR
DVGRVLGLPYGMVNRVAELIPNNPAKPVSLSDAIEGEPRLQEMRDSDESLKRLMEIALQL
EGLYRHASTHAAGVVIGDRELVELVPLYRDPKSDMLVTQYNMKYVEQAGLVKFDFLGLTT
LTILKRGLDFLKEQGITVDLSRIPLDDAKTFEMLAKGDTAGVFQFEGAGMRDMLKQMAAS
RLEDLIAGVSLYRPGPMANIPDYCRRKHGEPWEPPHEEIRDILEETYGIMVYQEQVMQIA
QKMAGYSLGGADLLRRAMGKKIAAEMEKQRAIFTEGATARGIPQEKAVEVFDLMARFADY
GFNKSHAAAYALVSYQTAWMKANHPVAFLAGCMSLAREKTDKLAALCQEARRMKIPVLPV
DINKSLADFSIETLEDGRQGIRYALSAIKRVGAAAMQSVVACRGDRPFQDLTDFAERCDP
KSLNKIQLESLAKAGAFDSLLKERHIVFSSADILLRRAQARAQEQQMGQAGLFGGAGQER
EILRLNEGRPWPDFERLSLEASAIGFHMSAHPLDAYRSVLRRLGVTPSNALENAAKTGTT
RVKIAGCVVDRKERPTRTGKKMAWVNLSDSGGGCEVTLFSETLTSCRDLLVAGQAILVTA
ELKVDGDALRITAQNVMDLEVAAAAERSEIRVWLKEDASLPDLASLLEEVQGGFGRVKLL
PSVEETQDVEISIPGHYRVTPRLAERLRTLRGVEKALQV
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagccgctggtggttctggcgcggaatgaggaaggactggcaaatctccagatt
ctgtcgtctgaaggatttctgaacggcgatccggctgatccttcggttgcggtcgacttt
ctgtgtcagcatgcggcgggactgtttctgctgacgggcggcaatcgcgggccgatcaac
aagctgattcttgaagaacagaaatccgacgcgcaggctcttctgagccgtttggaagaa
gctttccggggaaatatcgccgtcgagctgaaccggcttggagaggtgggggagcaggaa
gtcgaaagcgtcctgatcccgatggcggaccagatggatattcccttggtcgccaccaat
gaatgcttctttcccaagcctgaaatgcatgaggcccatgatgcgctgctgtgtatcgcg
cagggccggaccattgcggaagaagaccgctggcatgtgtctccacaggcctggttcaag
acgcctgcggaaatgcgggctgtctttcatgatcttccggaagcctgtgacaacacgctg
atcattgcgcaaaaatgtgcggtggcggcctgcacgcgcaagccgctactgccgatttgt
cccaaggtccgcgaaggctcgacggaagaagaaacgcttcgggccatggcttgggaaggg
ctggaaaagcgtcttgaagcgatcaatgcggatgaagagaagcggaaactttactccgag
cgccttcaggtggagctcgatatcatcgcgcggatgggcttcccgggctacttcctaatc
gttgccgactttattcaatgggccaaggcacatgatattcccgtcggcccggggcgtggc
tcgggcgcaggttcgctggtggcgtatgcactgacgattacggatatcgatcccattccg
ttcggactgctgttcgagcgctttctgaatcctgagcgtgtttccatgccggatttcgat
atcgacttctgtcaggaccgccgcgatgaagtgatccggtatgtgcgcgaggaatatggt
ggaagccgtgtggcgcagatcatcacgttcggaaagcttcaagccaaggcggcggtgcgc
gatgtcgggcgtgtgctggggctgccttacggcatggtcaaccgcgttgccgagctgatc
ccgaacaatccggccaagcctgtttcgctgtcggatgcgattgagggtgagccccgtctt
caggaaatgcgggacagcgatgaatcgctcaaaagactcatggaaatcgcgttgcagctc
gagggcctgtaccgtcatgcatccacccatgccgcgggtgtggtgatcggtgatcgcgag
ctggtggaactggtgccgctgtatcgcgatccgaagagcgacatgctcgtgacgcagtac
aatatgaaatatgtcgagcaagctggtctggtgaagtttgacttccttggcctgacaacg
ctcaccattctcaagcgaggtctggattttcttaaagaacaggggattacggtcgatctc
tcacgtattccgctggatgacgcgaagacgttcgagatgctggccaaaggcgatacggcc
ggcgtgttccagttcgaaggcgcgggtatgcgggacatgctcaagcagatggcggccagt
cggctggaggatctgattgcgggcgtgtcgctgtatcgtcccgggccgatggcaaacatc
ccggattactgtcgccgcaagcatggcgagccttgggagccgcctcacgaggaaatccgc
gatattcttgaagagacctatgggatcatggtctatcaggaacaggtcatgcagatcgcc
cagaagatggcgggctacagtctgggtggcgcggatctgctgcggcgtgcgatgggcaag
aagatcgccgcggaaatggaaaagcagcgcgcgatcttcactgagggtgcaacggcacgt
ggtattcctcaggaaaaagcggtcgaagtctttgatcttatggctcgttttgcggattac
ggctttaacaagtcgcacgccgcagcctatgcgctggtgtcctatcagacggcttggatg
aaggcgaaccatccggtcgcgtttctcgcgggctgcatgtctctggcacgggaaaaaacg
gacaaactggcggctctgtgtcaggaagcacggcgaatgaagattcccgtgttacccgtt
gatattaataaatctctggcagatttttccattgaaacactggaagacgggcgtcaggga
atccgttatgcgttgtcggctatcaaacgtgtgggcgcggccgcgatgcagagtgtcgtg
gcgtgccgtggggacaggccgtttcaggatctcacggattttgcggagcgctgtgatccg
aagagcctgaacaagatacagctggaaagtcttgcaaaagcaggggctttcgacagtctt
ctcaaggaacggcatatcgttttctcgagtgccgacattctgttgcggcgggctcaggcg
cgggcgcaggagcagcaaatgggtcaggccggactgttcggaggtgcggggcaggagcgt
gagattctgcgcctgaacgaaggccgcccatggcccgactttgagcgtctgtctctggaa
gcttcggctatcgggttccacatgagcgcgcatccgctggatgcgtatcgtagtgttctg
aggcggctgggtgtgacgccatccaacgctctggaaaatgctgcaaaaacagggacgacg
cgcgtcaagatcgccggttgtgttgtggatcgtaaggagcggccgacacggaccggcaag
aaaatggcctgggtcaatctgtccgatagcggtggcggatgtgaggtcacgctgttttcc
gaaacgctgacgtcctgccgggatctgctggtggcgggacaggccattctggtgacggcg
gaactcaaggtggatggcgatgcgctgcggatcacggcgcagaatgtcatggatctggag
gtcgccgctgcggccgagcgttcggaaatccgcgtctggctgaaggaggatgcgtccctg
ccggatctggcctctttgctggaagaggttcagggcggcttcgggcgtgtgaaactgctg
ccttccgtcgaggagacgcaggatgtcgaaatctccattccgggacattaccgggtgacg
ccacgtcttgcggagcggctgcggacattgcggggggttgagaaggccttacaggtctga
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