Gluconobacter oxydans DSM 3504: GLS_c01520
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Entry
GLS_c01520 CDS
T03563
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
goy
Gluconobacter oxydans DSM 3504
Pathway
goy03420
Nucleotide excision repair
goy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
goy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GLS_c01520
03430 Mismatch repair
GLS_c01520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
goy03400
]
GLS_c01520
Enzymes [BR:
goy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GLS_c01520
DNA repair and recombination proteins [BR:
goy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GLS_c01520
MMR (mismatch excision repair)
Other MMR factors
GLS_c01520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
AHK70080
UniProt:
A0A067Z3C5
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All DBs
Position
complement(163880..165787)
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AA seq
635 aa
AA seq
DB search
MTELEKALSELTPAQAAATNWVDGPLFVLAGPGSGKTRVLTTRVAKLLAETPDKSFRVMA
LTFTNKAADEMASRIEAVVPDQQQRATIGTFHSFCMQMLQQHGSHIGINPNFAIYSLESD
RADLLKEAIRANGLDSDDDRFLGMIDKLKARLIQPDGCAKLFKDSGVGQRVELVYSAYEA
ALRSANALDFGSLIAQSYRLISTYPGVALHYRRAYAYWMFDEFQDTTDGQYKLIKALAGD
GFRNVFAVADDDQIIYQWNGASYKQIQRFRADFNPTEIQLPTNYRCPPSIVAAANRLVVH
NTQRTAAKQPLEAGKTTLRYPDGQHINLLRYSTEEAEATSIAAGIAGMPEGKRGQIAVLA
RTRALLERMNTALANAGVAAAIAQRRDDFRSAQFLWLAAALRLAARPADRRALDTLTGAF
NRWFDLGVSSDDIAAGAEISGRSLLAEWAGAVGSREDDQANALTGMATALSAQPTTFRAF
IDQVLEKLPAEGSEDATDIDEDRTAWVSLVRSIGQAIGRDAGLDQFLQELALRSKEPPVP
DNAVTLMTIHSAKGKEFDHVYVIGLSEDVLPSFQSVKAGEQSAEMEEERRNCFVAITRAR
EWLCLSYADRYRGWSKQPSRFLLEMGLNLPQAVSA
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgactgaattggaaaaggcgctaagcgagctgacaccggcgcaagcggcagcgacaaac
tgggtcgatggccctctcttcgtgctagccgggccgggatcaggcaagacgcgcgtcctg
accacgcgcgtcgcgaagctcctcgcggaaacgccggacaaatcgttccgcgtcatggca
ttgactttcactaacaaggcggccgacgaaatggccagccgcatcgaggcggtcgtgccc
gaccagcagcagcgggcgaccatcggtacgttccactctttctgcatgcagatgttgcag
cagcacggctcgcatatcggcataaatccgaatttcgcgatctattcgctggagtcggat
cgggcggaccttctcaaggaagcaatccgggcgaacgggctggacagcgacgacgatcgg
ttcctgggtatgatcgacaagctgaaggcacggttgatccagccggatggctgcgcgaag
ctattcaaggacagcggcgtcgggcagcgcgtcgagctggtctatagcgcctatgaagcg
gcgctccgatcggctaacgcgctcgatttcggatcgctcatcgcgcagtcctaccgcctg
atttccacatacccgggcgtcgcgctccactatcgccgcgcctacgcttattggatgttt
gatgagtttcaggacacgacggatgggcaatacaagctcatcaaagccctcgccggagac
ggcttccgcaacgtgttcgcggtcgcagatgacgaccaaattatctatcagtggaacggc
gcgagctataagcagatccagcggtttcgggctgacttcaacccgactgaaatccagctc
cccaccaactatcgctgcccgccgagcatcgtcgccgccgccaatcggctcgtcgttcac
aacacgcagcgcacggctgccaagcagccgctggaagcgggtaagacgacgctgcgttac
ccggacggacagcacattaacctcttgcgctattcgacggaggaggcagaggcgacgtcg
atagcggctggtatcgccgggatgcccgaaggcaagcgtggccagatcgcggtgctggcg
cggacccgggcgctgctcgaacgaatgaacaccgcgctcgcgaatgccggggtcgccgcc
gctattgcacagcgccgggacgacttccggtctgcacaatttttgtggctggccgctgcg
ttgcggctggcggcacgccccgccgatcggcgcgccctcgatacgttgaccggcgcgttc
aatcgctggttcgaccttggcgtttcgtccgacgacatcgccgcaggcgcggaaatcagc
ggccgttcgctgctcgccgaatgggccggggccgttggatctagggaagacgaccaagca
aacgccctgaccggcatggcgacggcgctgagcgcccagccgacgacgtttcgcgcgttc
atcgaccaagttctcgaaaaacttcccgccgagggaagcgaggacgcgactgatatcgac
gaggaccggacggcttgggtgtcactcgttcggagtattggtcaggccatcgggcgcgac
gcgggactcgatcaatttctacaggaactggcgctgcgttcgaaagaaccgccggttccc
gacaatgcggtcacgctcatgaccattcacagcgccaaggggaaggaattcgaccacgtc
tatgtgatcggcctgtccgaagacgttttacccagttttcagagcgtgaaggccggggaa
caaagcgccgaaatggaagaggagcggcgcaactgctttgtggcgatcacgcgggcgcgg
gagtggctctgcctctcctatgctgatcgctaccgggggtggtcaaagcagccttcgcgc
ttcctgctggaaatggggctgaacctgccgcaagccgtgagtgcgtaa
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