Gluconobacter oxydans DSM 3504: GLS_c02270
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Entry
GLS_c02270 CDS
T03563
Symbol
rhlE2
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
goy
Gluconobacter oxydans DSM 3504
Pathway
goy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
goy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLS_c02270 (rhlE2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
goy03019
]
GLS_c02270 (rhlE2)
Enzymes [BR:
goy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GLS_c02270 (rhlE2)
Messenger RNA biogenesis [BR:
goy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GLS_c02270 (rhlE2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25_NTPase-like
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AHK70150
UniProt:
A0A067Z3J8
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All DBs
Position
complement(240199..241494)
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AA seq
431 aa
AA seq
DB search
MTSFAELKLAEPIQKALAEEGYTTPTPIQAGAIPYLLEGRDLLGLAQTGTGKTAAFALPI
LNHIFTNRRPAPPKGVRALVLAPTRELASQIGESFAAYARHMKFSYAVVFGGVGQGRQIE
ATRRGVDVLVAAPGRLLDLIGQKHIDLSTLEILVLDEADRMLDMGFVRDIQRIMALLPKQ
RQTLLFSATMPPSISDLAHSLLKNPATVQVTPESSTVDRINQAVMFVDSGSKKDAALMLL
ESPSVARAVVFTLMKHEANKVAEFLNKNGIRAEAIHGNKSQGARERAMAGFRSGAIKALV
ATDIAARGIDVDEVSHVFNYDLPNVPESYVHRIGRTARAGREGCAVSLCDAEQRAWLKDI
EKKIGKPIPVVTDHPFHSEEARLSTQRPPVLGGGRGGGGGGRRRSGPPSGGRPGGGRGGA
PGRGGPRPGAR
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtttcgccgaactcaagcttgccgagccaattcagaaggctctcgcggaagaa
ggctacaccacgccgaccccgattcaggccggtgccatcccttatctgctcgaaggtcgc
gatcttctggggctggcccagaccggaaccggcaagacggcagcattcgcgcttcccatc
ctgaaccatatcttcacgaatcgtcgccctgcgccgccgaagggcgtccgtgccctggtt
cttgcgcccacgcgtgaactggcgtcgcagatcggtgagagctttgccgcttatgcgcga
cacatgaagttctcctatgccgtcgtgttcggtggggtcgggcagggacgccagatcgag
gccacccgtcgcggtgtggatgtccttgtggccgcgcccggccgtctgcttgatctgatc
gggcagaagcatatcgatctctctactttggaaatcctcgttctcgatgaggccgaccgg
atgctggacatgggcttcgtgcgcgatatccagcgcatcatggccctgcttcccaagcag
cgtcagaccctgctgttctcggcaaccatgccgccgtccatcagcgatctggcccattcg
cttctgaagaacccggcaacggttcaggtcacgcctgaatcgagcacggttgatcgtatc
aatcaggctgtcatgttcgttgactcgggcagcaagaaagatgcggctctcatgctgctg
gaaagcccgagcgtagcccgtgctgtggtattcacgctgatgaagcatgaagccaacaag
gttgccgagttcctgaacaagaacgggatccgcgcggaagccatccacggcaacaagtcc
cagggtgcccgtgagcgcgctatggccggtttccgcagtggcgccatcaaggctctggtg
gcaaccgacatcgcggcccgcggtatcgacgtggacgaggtcagccacgtcttcaattac
gatctgccgaatgtgccggaatcctatgtccatcgtatcggccggacggcccgggcaggg
cgtgagggttgcgcagtctccctgtgtgacgctgaacagcgcgcatggctcaaggatatt
gagaagaagatcggcaagcccattccggttgtgacggatcaccccttccattccgaagag
gcgcgactgtccacgcagcgtccgccggttctgggcggtggtcgtggtggcggcggtggc
ggacgtcgtcgctcgggaccgccctcgggtggtcgtccaggtggcggccgtggtggcgcc
ccgggtcgtggtggtcctcgcccaggcgcgcgctga
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