Gluconobacter oxydans DSM 3504: GLS_c07170
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Entry
GLS_c07170 CDS
T03563
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
goy
Gluconobacter oxydans DSM 3504
Brite
KEGG Orthology (KO) [BR:
goy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
goy03016
]
GLS_c07170 (rnd)
Enzymes [BR:
goy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
GLS_c07170 (rnd)
Transfer RNA biogenesis [BR:
goy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GLS_c07170 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AHK70630
UniProt:
A0A067Z4V7
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Position
complement(787039..788229)
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AA seq
396 aa
AA seq
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MRSKAPTFPTPVLLTSSEEVARICEKLQNEPFVTIDTEFVRERTYWPELCLVQLAGTEDV
VLIDTLAPGIDLAPLGALLAKPDCTKVFHAARQDLEIFLHIFDRLPASVFDTQVAAMVAG
FGDQVGYDSLVGAITGRSIDKAHRFSDWSARPLSKAQIAYAAADVTHLRTVYDALRKQLA
EQDRLHWADSEQAILTEEKTFRPDPRRLWEKLKARTSNRRMLGILREVTAWREQEAQNAD
IPRQRVIRDESLLEIAAVHPDTVEALSRIRGVTRGFAEGKMGKGLLEAIRIAQELPESEL
PKAPSKSDRPRPSTALVALLRVLLAAKCEQHKVAPRLVASSDDLDLIALGETDVGALKGW
RRELFGLDAQALVRGEIALAVVNGLVELQRVAEPAS
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcgaaagctccgaccttcccgacccccgttctcctgacctccagtgaggaggtg
gcccgtatctgcgaaaaactgcagaacgagcctttcgtgaccatcgacacggaattcgtc
cgggaacggacctactggccggagctctgcctcgtccagcttgccggaaccgaggacgtt
gtcctgatcgacacgctggctcccggcatcgatcttgcccctctcggcgctcttctggcc
aaaccggattgcaccaaggtctttcatgccgcccggcaggaccttgagattttcctccat
attttcgatcgccttccggcttcggttttcgatacgcaggttgctgccatggtggccggc
ttcggcgatcaggttggctatgacagtctggttggcgcgattaccggtcgcagcattgac
aaggcacaccgtttcagtgactggtcagcccgtccgctgagcaaggcgcagatcgcctat
gccgcggctgatgtcacgcatctgcgcacggtttacgatgccctgcgcaaacagcttgcc
gaacaggaccgtctgcactgggccgactccgaacaggctatcctgacggaagaaaagacc
ttccgtcccgatccccgtcgcctgtgggaaaagctgaaggcccggaccagcaaccgccgg
atgcttggcattttgcgtgaagtcacggcctggcgcgaacaggaagcccagaacgccgat
attccgcgccagcgcgtcatccgtgacgaaagcctgctggaaatcgcggctgttcatccg
gatacggtcgaggccctttcccgcatccgcggcgtgacgcgcggttttgccgagggtaag
atgggcaaaggcctgctcgaagcaatccgtatcgcgcaggagctgcctgagtccgaactt
cccaaagccccttcgaaatccgatcgcccacggccgtccacagccctcgtagcgcttctg
cgggttctgctggccgccaagtgcgaacagcacaaggtggccccccgtctggtggcttct
tcggacgatctggacctgattgcgcttggtgaaaccgatgtcggcgcgctgaagggctgg
cgtcgcgaacttttcggtctggatgcccaggcgctggtccgtggcgaaatcgcgctggcc
gtcgtgaacggccttgtggagcttcagcgggtcgccgaaccggcctcgtaa
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