Gluconobacter oxydans DSM 3504: GLS_c10720
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Entry
GLS_c10720 CDS
T03563
Symbol
rhlE3
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
goy
Gluconobacter oxydans DSM 3504
Pathway
goy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
goy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLS_c10720 (rhlE3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
goy03019
]
GLS_c10720 (rhlE3)
Enzymes [BR:
goy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GLS_c10720 (rhlE3)
Messenger RNA biogenesis [BR:
goy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GLS_c10720 (rhlE3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_11
Spectrin_Dys-1
P-loop_SecA
CMS1
Motif
Other DBs
NCBI-ProteinID:
AHK70980
UniProt:
A0A067Z5T6
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All DBs
Position
1213835..1215133
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AA seq
432 aa
AA seq
DB search
MSPTSAQAFADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGKTAS
FALPLLHRLAATPRPAPKNGARVLVLAPTRELVSQIADGFESFSRHQPVRVTTIFGGVSQ
VHQVKALEEGVDIIVAAPGRLLDLIEQGLCDLSQLEALVLDEADQMLDMGFAKPIERIVA
TLPEDRHTVLFSATMPKSIAALVESLLRNPAKVEIAPPSSTVDRIEQSVMFLNASDKKAA
LLAQLRTPGIGQAVVFTLQKNIANDVCTFLTESGITAEALHGNRSQGQRERALNAFREGD
VQVLVATDIAARGIDVDTVTHVINHDLPSLPESYVHRIGRTGRAGRSGFAITLCDAEQRA
WLHAVEREIGRTLDVHDSHEWHSEEARNSTMRPPVLGGGPVKQVKPQKVRERRVWTEEEK
MAARAAAAAKAS
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtccccgacttctgcccaggcttttgccgatctcgccctggcgcccacgcttctccgc
gcgctggatgaagcgggttacgtcaagcctacgcctattcaggcccagtccatcccgctg
ctgctggaaggccgtgatctgctggggctggcccagaccggcaccggcaagacggcctct
ttcgcactccccctgctgcaccggctcgccgcaacgccccgtcccgcacccaaaaacggc
gcgcgcgttctggttctggctcccacacgcgaactggtctcccagattgcggacgggttc
gagagcttcagccgtcaccagccggtgcgcgtcacgacgattttcggcggcgtcagtcag
gtgcatcaggtcaaggcgcttgaagagggtgtagacatcatcgtcgccgcaccaggccgc
ctgctggacctgatcgagcagggtctatgcgacctgtcgcagcttgaggcgctggtgctg
gatgaagcggaccagatgctggacatgggctttgccaagccgatcgagcgcattgtcgca
acgctccccgaagaccggcacacggtgctgttttccgcaacgatgccgaaatccatcgca
gccctcgtcgagagcctcctgcgtaacccggccaaggtcgagatcgcaccgccgtcgagc
acggtggaccggatcgaacagtcggtcatgttcctcaatgcgtccgacaagaaagcggct
cttctggcgcagctccggacgccgggcatcggtcaggccgtcgtcttcacgttgcagaag
aacatcgccaacgacgtctgcaccttcctgacggaatccggcatcacggccgaagccctg
cacggcaaccgctcgcagggtcagcgcgagcgcgccctgaatgctttccgtgaaggtgac
gttcaggttctggtggcaaccgatatcgccgcccgcggcatcgacgtcgatacggtcacg
catgtcatcaaccatgatctgccgagcctgccggaaagctatgtgcaccggatcggacgc
acgggccgtgcaggccgcagcggtttcgccatcacgctgtgcgatgccgagcagcgcgcc
tggctgcatgccgtcgagcgtgaaatcggccggacgctggacgttcatgacagccatgaa
tggcattcggaagaggcgcggaactccaccatgcgcccgcccgtgctcggcggcggtccg
gtcaagcaggtcaagccgcagaaggtgcgcgagcgccgcgtctggaccgaagaggaaaag
atggccgcccgggcagcggcggctgccaaagcgtcctga
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