Gluconobacter oxydans DSM 3504: GLS_c19640
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Entry
GLS_c19640 CDS
T03563
Name
(GenBank) putative ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
goy
Gluconobacter oxydans DSM 3504
Brite
KEGG Orthology (KO) [BR:
goy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
goy03016
]
GLS_c19640
Enzymes [BR:
goy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
GLS_c19640
Transfer RNA biogenesis [BR:
goy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GLS_c19640
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AHK71838
UniProt:
A0A067Z5Y6
LinkDB
All DBs
Position
complement(2236126..2236770)
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AA seq
214 aa
AA seq
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MSQQNAIHLYDGDLPDDFDLGPLVAIDTETMGLNPHRDRLCLVQLSAGDGEAHLVQIKPV
SMGGRGYDCPNLKALLTDDSVTKLMHFARFDVAVLQNAFNITIPSVICTKIAARLVYTFT
DRHGLAYLCRDLLGVEISKHQQSSDWGAQTLTPDQLRYAASDVLYLHALWDKLEAMLIRE
NRRDLAQACYDFLPARCRLDLMGYEEPDIFSHRA
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcagaacgccatccatctttatgacggcgatctgccagacgatttcgatctc
ggcccccttgttgccatcgataccgagaccatgggtctcaatccccatcgtgaccgcctc
tgcctcgtccagctctcagccggcgacggtgaagcccatctcgttcagatcaaaccggtc
tccatgggcggccgcggctatgactgcccgaatctcaaggctcttctgacagacgattcc
gtcaccaagctgatgcatttcgcacgctttgacgtcgcagtcctgcagaacgccttcaac
atcacaatcccgtcggtcatctgcaccaagatcgccgcccggctggtctacaccttcacc
gaccgccacggcctggcctatctgtgccgcgaccttctgggtgtcgaaatctccaaacac
cagcagagttcggactggggcgcacagaccctcacccccgaccagctccgctatgccgct
tcggacgtgctgtatcttcacgcattgtgggataagctcgaagccatgctgatccgtgaa
aaccgccgtgacctcgcgcaggcctgctacgatttccttccggcccgctgccggctggac
ctcatgggctacgaagagcccgacattttctcgcaccgcgcctga
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