Gluconobacter oxydans DSM 3504: GLS_c25120
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Entry
GLS_c25120 CDS
T03563
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
goy
Gluconobacter oxydans DSM 3504
Pathway
goy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
goy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLS_c25120 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
goy03019
]
GLS_c25120 (recQ)
03400 DNA repair and recombination proteins [BR:
goy03400
]
GLS_c25120 (recQ)
Enzymes [BR:
goy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GLS_c25120 (recQ)
Messenger RNA biogenesis [BR:
goy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GLS_c25120 (recQ)
DNA repair and recombination proteins [BR:
goy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GLS_c25120 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
AHK72378
UniProt:
A0A067Z741
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All DBs
Position
2855841..2857709
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AA seq
622 aa
AA seq
DB search
MPQAQNSPPVAPGSNEPPTPEGVLAEVFGFPGFRGLQQDAVETVMRGEDVLVLMPTGGGK
SLCYQVPALCRDGMGLVISPLIALMDDQVAGLRQLGVRAAALHSGLEPDERDELQSDLRN
GRIDILYISPERLLQPATANFLSKRQISLIAIDEAHCISAWGHEFRPEYRALASLPEMFP
GVPRIALTATADPRTRDDILNALGMPDARVLMASFHRPNLIVEARAKASESRQLLETLQS
HREGASIVYCGSRNKTERVATMLRDKGLTALPFHAGLSSVEKRATLMRFRSGEEMVIVAT
IAFGMGIDRPDVRCVVHLDMPSSPEAYYQQIGRAGRDGEPSDTLLLYGGEDMARARYWLE
QSSAPDHEKRVMQARLESMIALTETTGCRTQALLACFGENLAQPCGHCDNCISPVSTFDG
TQAAQKVLSAIYRTGQRLGAVQLSNVLRGKLNETIERNAYQHLSVFGIGKEHSEQWWRAV
IRQLIARGAIRMHGEYGSLALQSEIARPILRGEERVALRLEAKAALTASAGSDGNTENDR
LSADEKPYFDALRQWRLSEAREQEIPPYVIFHDSVLRDIAREQPASRAELGSIKGVGASK
LDRYGAAVLTVLREIREPASAQ
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaggcgcagaacagccctcccgtcgccccgggatcgaatgagcctccgacacct
gaaggcgtgctggcggaagtttttggctttcctggcttccgcggccttcagcaggacgcc
gtcgaaacggtcatgcggggggaggacgtgctcgtccttatgccgaccggcggtggcaag
agcctgtgctatcaggttcccgcactctgccgggacggcatgggtctggtcatctctccc
ctgatcgccctgatggacgatcaggttgcgggcctgagacagctcggcgtccgcgcggcc
gcgctgcattccgggctggagccggatgagcgcgacgaacttcagagcgatctgcgcaat
ggccggatcgacattctctatatttcgccagagcgcctgcttcagcctgcaacagcgaat
ttcctgtcaaaacgccagatctcgctgatcgcgattgacgaagcacactgcatttcggcc
tggggccatgaattccgccctgaataccgggcactcgccagcctgccggaaatgttcccg
ggcgtcccgcgcattgccctgacggctacggccgatccccggacgcgggatgatatcctg
aacgcgctcggtatgcccgatgcgcgggtcctgatggcgagcttccatcgccccaacctg
atcgtggaagcccgcgccaaggccagcgaaagccgacaactcctcgaaacgcttcagagc
catcgcgaaggcgcctccatcgtttattgcggcagtcgcaacaagacggaacgcgtcgcc
accatgctgcgggacaagggcctgaccgcactgccattccatgccggcctctcttcggtc
gagaagcgggccacgctgatgcgtttccgctcgggggaggaaatggtgatcgtcgcgacg
attgcattcggcatggggatcgaccgcccggacgtccgctgcgtcgtccatctggacatg
ccgtcctcgccggaagcgtattaccagcagatcggacgggcagggcgcgatggcgagccc
tcggacacgcttctgctctatggcggcgaggacatggcccgggcgcggtactggctggaa
cagtccagcgcccccgaccacgaaaagcgcgtcatgcaggcccgtctggaaagcatgatc
gccctcacggagaccacaggctgccgcacacaggcactcctcgcgtgtttcggagaaaac
ctcgcgcagccctgcggtcactgcgacaactgcatcagccccgtatcgacattcgatggc
acccaggctgcccagaaagtcctctcagccatttatcgcaccggccagcgtctcggagca
gtccagctttccaatgtgctgcgtggaaagctcaacgaaaccatcgaacgcaatgcctat
cagcatctttcggttttcgggatcggcaaggaacacagcgagcagtggtggcgcgccgtc
atccggcagctgatcgcgcgcggggccatccggatgcatggcgaatatggaagtctcgcg
cttcagagcgaaatcgcgcgtccgatcctgcgcggcgaggagcgcgtggcactcaggttg
gaagccaaggccgccctgaccgccagcgcgggctcggacggcaatacggaaaatgaccgc
ctgtcagcagacgaaaaaccgtatttcgacgccctgcgccagtggcgcctctccgaagca
cgggaacaggaaatcccaccctacgtcattttccacgattcggtgctgcgggacatcgcc
cgcgaacagcctgccagccgcgctgaactgggaagcatcaagggcgtcggcgcctcgaaa
ctggaccgctacggagctgcggtcctgaccgtcctgcgcgaaatccgcgaacccgcctca
gcccagtaa
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