Gordonibacter pamelaeae: GPA_00900
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Entry
GPA_00900 CDS
T02609
Name
(GenBank) Membrane carboxypeptidase (penicillin-binding protein)
KO
K21464
penicillin-binding protein 2D [EC:
2.4.99.28
3.4.16.4
]
Organism
gpa
Gordonibacter pamelaeae
Pathway
gpa00550
Peptidoglycan biosynthesis
gpa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gpa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GPA_00900
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gpa01003
]
GPA_00900
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gpa01011
]
GPA_00900
Enzymes [BR:
gpa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
GPA_00900
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GPA_00900
Glycosyltransferases [BR:
gpa01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
GPA_00900
Peptidoglycan biosynthesis and degradation proteins [BR:
gpa01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
GPA_00900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PASTA
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
CBL03270
UniProt:
D6E6C3
LinkDB
All DBs
Position
87131..89383
Genome browser
AA seq
750 aa
AA seq
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MKIRRKQRETRTHAAKWLLLVAAAAFCFVAYQGVQGVLHVIDDWTSDLPSLSSTDAFNYA
QESTMYAGDQSTLLAEFQLEKRDPLASADQVSPYVLKGTVDTEDVRFYEHTGVDLPGIAR
AVLVNLGGGALEGASTITQQLVRNTVLSEEANDISFERKIREAQLAVDMEKMYSKDEILL
MYLNTINYGDGCYGIEAAAQNYFQVSALNLTLSQAAALVGIPQSPTYLNPKENPEACQER
RNVVLDRMLTAGDITQEEHDAAQAVPLEEDLNLAGDPPSQGIYAYPYFTSYVRDLLTAEN
NPFGLSYADLFEGGYTIYTSLDPAMQEKAEAACAAQNEVIADNLESSIVAVEPSTGYIKA
LVGGKDYFSNQWNVATQGGQPTGSSFKPFTLAAAIEQGINPATMIDCTNPMTITGGKELW
NFGNTNYGIRSIASATTVSSNTGYYRLAEKVTPAAMNEMAQRLGANFETQNLPIATLGTE
NVTPLDMAKAYATFATGGMRHEAVAVTKIVDKNGNVVYEAPTSDEGERVISEEVAGAVTK
VLRTVFESSDGTAYGMMPTNGQPVAGKTGTVQEFRGHWLVGYSPQLSCAAWIGSRNYEQT
DEDLTANYLWRDFMSRALAGTEIVQFPETKDPEYKNPFNTEQKEKYAKQTQEEKDKELAA
KAAGAVGLSLSDAASLLNGYDVSYTEEYSSSVAAGIVISQSVQNGKIVLVVSKGPKPVDP
TPTPTPTPTPDPDPPPDPDPTPDPPPDGTG
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacggcgaaaacagcgcgaaacgcgcacccatgccgcgaaatggctcctgctt
gtcgcagcagcggctttctgcttcgtggcgtatcaaggcgtccagggcgtgcttcacgtc
atagacgattggacgagcgacctccccagcctgtcgagcaccgacgcgttcaactacgcg
caggagtcgacgatgtacgcgggcgaccagagcacgcttttggccgagttccagcttgag
aagcgggacccgctcgcctcggccgaccaggtgagcccctacgtgctcaagggcacggtg
gacaccgaggatgtgcgcttctacgagcataccggcgtggaccttcccggcatcgcacgc
gccgtgctcgtcaacctgggcggcggggcgctcgagggcgcctccaccatcacgcagcag
ctcgtgcgcaacaccgtgctgtccgaggaggccaacgacatctcgttcgagcgcaagatc
cgcgaagcgcagctggcggtggacatggagaagatgtactccaaagacgagatactcctc
atgtacctgaacaccatcaactacggcgacggctgctacggcatagaggcggcggcacag
aactacttccaggtgtcggcgctcaacttgacgctgtcgcaggctgccgcccttgtgggc
atcccccagtcgccgacgtacctcaacccgaaggagaacccggaggcctgccaggagcgc
cgcaacgtggtgctcgaccgcatgctcacggccggcgacatcacgcaggaggagcacgat
gcagcccaagcggtgccgctggaggaggatctgaacctggccggcgatccgcccagccag
ggaatctacgcctatccttactttaccagctatgtccgcgaccttctgacggccgagaac
aaccccttcggcctctcctatgccgacctgttcgagggtggctacaccatctacacgtcg
ctcgacccggccatgcaggagaaggctgaagcggcctgcgccgcccaaaacgaggtcatt
gccgataatctcgagtcctccatcgtggccgtcgagccaagtacgggctatataaaagcc
ctcgtgggcggcaaggactatttctctaaccaatggaacgtcgccacgcagggaggccag
cctacaggatcgtcgttcaagccgttcaccttggcggcagccatcgagcagggcatcaat
cccgcaacgatgatcgactgcacgaacccgatgaccataacgggcggcaaagagctttgg
aacttcggcaataccaactacgggatacgcagcatcgcaagcgccaccaccgtgtcgtcg
aacactggctactaccgacttgccgaaaaagtgacccctgccgccatgaacgagatggcg
caacgcctcggggcgaacttcgaaacgcagaacctgcctattgccacgctgggcacggag
aacgtcacgcccctcgatatggcgaaagcctacgccacctttgctaccggtgggatgcga
cacgaggcggtagccgtgacgaagatcgtggacaagaacggcaacgtggtctacgaggca
ccgaccagcgacgagggagagcgtgtgatctccgaagaggtggcgggtgccgtgaccaag
gtgcttcgcacggttttcgaatcttctgatggcaccgcctacggcatgatgccgacgaac
gggcaaccggtggcgggcaagacgggcaccgtgcaggaatttcgcggacactggctcgta
ggatactcgccgcaactctcgtgcgccgcttggatcggcagccgcaattacgaacagacc
gacgaggacctcactgccaactatctgtggagggacttcatgtcgcgagccctcgcgggt
acggagatcgtgcaattccccgagacgaaggatcccgagtacaagaaccccttcaacacg
gagcagaaggagaagtacgcgaagcaaacgcaggaagagaaggacaaggagctcgccgcg
aaggcggcgggtgccgtggggctttccctaagcgatgccgcctccctgctgaacgggtac
gacgtctcctataccgaggagtattcgagcagcgtcgcagcgggcatcgtcatcagccag
agcgtgcagaacggcaagatcgtgctcgtggtgtcgaaggggccgaagccggttgacccg
acccccacgccgacacctaccccgacgcccgacccggatccacctcccgacccggaccca
acccccgaccctccgcctgacggcacgggatga
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