KEGG   Gordonibacter pamelaeae: GPA_01580
Entry
GPA_01580         CDS       T02609                                 
Name
(GenBank) Transcription antiterminator
  KO
K02601  transcription termination/antitermination protein NusG
Organism
gpa  Gordonibacter pamelaeae
Brite
KEGG Orthology (KO) [BR:gpa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gpa03021]
    GPA_01580
   03009 Ribosome biogenesis [BR:gpa03009]
    GPA_01580
Transcription machinery [BR:gpa03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     GPA_01580
Ribosome biogenesis [BR:gpa03009]
 Prokaryotic type
  rRNA transcription factors
   GPA_01580
SSDB
Motif
Pfam: NusG KOW KOW2_Spt5
Other DBs
NCBI-ProteinID: CBL03312
UniProt: D6E6G5
LinkDB
Position
151185..152783
AA seq 532 aa
MWYVAQVQAGRESATRDLCLRLVSSDVLEECFMPEYETMWRVRGEWKLARRLLFPGYLFF
VTGDAEELNKELLRVPLPIRLLGNEENSFFPLTKKEQDWFLSFMDGEHIVRMSEGYITGD
KVTVTRGPLMGFEGDIRKIDRHKRRALPRRHPLRPHRAGKRRPGSSKEDRVSHPNRTVMG
KSVEPVGGIFAGPRSKGRAHHFLGSSSEWQAVNLKRAIAITVFVLSALAFFFLVFNGLFV
IYAETCHPELTWEQVAEVEVDGKPASPSEGEEAPQSMRPQIELALSLFSAVVMLISARLV
WRYYRKGYEVKEEPVVFPQKGSEIRWRKIFGSQTDLKENVQAYADEFLVNAFVEPRMVFS
RISESVSPGRRMLDSVVSYEVLPPTERGLSFFDADDLMLKKDKENRKFRSCSLVVPVSFQ
KRGKLVMKQEVRNASGTILPVLKQSEFVARILELIHSFLASVCVDADAKNRPIGNLPQWD
DLLSDLEAAFRSWFIADDGRNELQKSGDSNSRRQIAQLPSRSISAGNLVFSS
NT seq 1599 nt   +upstreamnt  +downstreamnt
atgtggtacgtggcgcaggtgcaggcggggcgcgagtccgcgacgcgcgacctctgcctt
cgcctggtgtcctcggacgtgctcgaggagtgcttcatgcccgagtacgagaccatgtgg
cgcgtccgcggcgagtggaagctggcgcgccgcctgttgttccccggctacctgttcttt
gtcacgggcgatgccgaggagctcaacaaagagctgctgcgcgtacccctgcccattcgc
ctgctgggcaacgaggagaactccttcttcccgctgacgaagaaggagcaggactggttc
ctgtcgttcatggacggcgagcacatcgtccgcatgagcgagggctacatcacaggcgac
aaggtcacggtgacgcgcggccccctcatgggcttcgagggcgacatccgcaagatcgac
cgccataagcgccgcgccttacctcgacgtcaccctcttcggccgcaccgtgccggcaag
cgtcggcctggaagtagtaaggaagaccgcgtgagccacccgaaccggacggttatgggg
aagagtgtcgaacctgtcggcggtatttttgcaggcccgcgatcgaagggaagagcgcat
cattttcttgggtcttcgtccgaatggcaggctgtcaatctgaaacgcgccattgcgatc
accgttttcgtgctgtcggcactcgccttcttctttctcgtcttcaacggtcttttcgtg
atatatgccgaaacctgtcacccggagctgacttgggagcaggttgccgaagttgaggta
gacgggaaacccgcgtctccttccgaaggcgaagaggcacctcaaagcatgcgcccgcag
atcgagctggccttgtcgctgttcagcgcagtggtcatgcttatttcggccaggcttgtc
tggcggtactaccggaagggctatgaagtcaaagaggagccggtcgtgttcccccaaaag
gggagcgagattcggtggcgtaaaatttttggctctcaaacagatctgaaggagaacgtc
caagcgtatgcggacgagttcctcgtcaacgcgtttgtggagccccgcatggtgttctcc
cgcatcagcgagagcgtgagcccgggcaggcggatgctggacagcgttgtgagctacgag
gttcttcctcccactgagcgggggttgagctttttcgacgccgacgacttgatgttgaag
aaggataaggagaaccgcaagttccggtcctgttccttggttgtgccagtgagttttcag
aaaaggggcaagctggtcatgaaacaggaagtgcggaacgcgtccggaaccattctgccg
gtgttgaagcaaagcgagttcgttgcccgcattctcgagttgatccatagtttccttgct
agtgtatgtgtcgacgctgatgcgaagaatcgtcccattgggaatctgccccaatgggac
gatttgctatctgatttagaggcggcttttcggagctggttcatcgccgatgacggtcgg
aatgagctgcaaaagtctggagattcaaactccagaagacaaatagctcaactacctagc
cggagtatttctgcaggtaatcttgttttttcgtcttga

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