KEGG   Gordonibacter pamelaeae: GPA_06000
Entry
GPA_06000         CDS       T02609                                 
Name
(GenBank) signal recognition particle subunit FFH/SRP54 (srp54)
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
gpa  Gordonibacter pamelaeae
Pathway
gpa02024  Quorum sensing
gpa03060  Protein export
gpa03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:gpa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    GPA_06000
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    GPA_06000
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GPA_06000
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:gpa02044]
    GPA_06000
Enzymes [BR:gpa01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     GPA_06000
Secretion system [BR:gpa02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   GPA_06000
  Eukaryotic Sec-SRP protein
   GPA_06000
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 Zeta_toxin CbiA AAA_17 AAA_33 nSTAND3 MMR_HSR1 AAA_16 Catalase_C NACHT SLFN-g3_helicase ResIII ArsA_ATPase KTI12 AAA APS_kinase AAA_5 AAA_14 AAA_7 AAA_18 cobW Pox_A3L NPHP3_N AAA_24 Thymidylate_kin AAA_31 Med8 TsaE RBD_LARS1
Other DBs
NCBI-ProteinID: CBL03520
UniProt: D6E723
LinkDB
Position
complement(586787..588202)
AA seq 471 aa
MLENLSERLQGIFSGLRGKGRLTEDDINDAMREIRMALLEADVNFKVVKGFIARTKERCL
EAEVLDSLTPAQNVIKIVLDELTELLGRTDSKLVLGSRIPNVIMLVGLQGSGKTTAAAKL
AYRLKQENHSPLLVACDVYRPAAADQLQTLGGEIGVRVYRGDGQDPVRIATEGVQDAIDN
LRDVVIVDTAGRLHVDDEMMDEAEAIKRAVKPDQILMVVDAMTGQDVVNVSAAFAERVDF
DGVIMSKMDGDARGGGALSIKQVTGKPIKFISSGEKPDSLEEFHPDRMAKRILGMGDVVS
LIESAVKVQQEEVEQEQAERMMRANLTLNDFIDMNRQIRKMGGISKLISALPGGDKAMSQ
GQVDEGALDHMEVIINSMTKAEREKPDLLNGSRRARIAAGAGVTVSDVNQLIKKFNETKK
MMKKMMPAVEDLQGGKKGKKGKKGRRRRMGLPGMGGMSMADIKKLQDMMGE
NT seq 1416 nt   +upstreamnt  +downstreamnt
atgctcgagaacctctccgaacgccttcagggcatattcagcgggctgcgcggcaagggc
cgcctgaccgaggacgacatcaacgacgccatgcgcgagatccgcatggcgcttctggaa
gccgacgtgaacttcaaggtggtgaagggcttcatcgcccgcacgaaggagcgctgcctg
gaggcggaggtgctcgactcgctcacgccggcgcagaacgtcatcaagatcgtgctcgac
gagctcaccgagctcttgggccgcacggacagcaagctcgtcctgggcagccgtatcccc
aacgtcatcatgctcgtgggcctgcagggctccggcaagacgacggccgccgcgaagctg
gcctaccgcctgaagcaggagaaccactcgcccctgctcgtggcctgcgacgtgtaccgt
cccgccgcggccgaccagctgcagaccctcggcggcgagatcggcgtgcgcgtgtaccgc
ggcgacgggcaggacccggtgcgcatcgccaccgagggcgtccaggacgccatcgacaac
ctgcgcgacgtggtcatcgtggacacggcgggccgtttgcacgtggacgacgagatgatg
gacgaggccgaggccatcaagcgggcggtcaagcccgaccagatcctcatggtggtggac
gccatgaccggccaggacgtggtgaacgtgtcggccgccttcgccgagcgcgtggacttc
gacggcgttatcatgtccaagatggacggcgacgcccgcggcggcggcgcgctgtccatc
aagcaggtcaccggcaagcccatcaagttcatctcgtccggcgagaagccggattccctc
gaggagttccatcccgaccgcatggcgaagcggatacttgggatgggcgacgtggtcagc
ctcatcgagagcgccgtcaaggtgcagcaggaagaggtggagcaggagcaggccgagcgc
atgatgcgcgcgaacctcacgctcaacgacttcatcgacatgaaccgtcagatacgcaag
atgggcggcatatcgaagctgatcagcgcgctgcccggcggcgacaaggccatgtcgcag
ggccaggtggacgagggggcgctcgaccatatggaggtcatcatcaactccatgaccaag
gccgagcgcgagaagcccgatctgctgaacggctcgcggcgcgcccgcatcgccgccggc
gccggcgtgaccgtctcggacgtgaaccagctgatcaagaagttcaacgagacgaagaag
atgatgaagaagatgatgcccgccgttgaggacctgcaaggcggcaagaagggcaagaag
ggcaagaagggccgccggcgtcgcatgggcctgcccggcatggggggcatgagcatggcc
gacatcaagaaactccaggacatgatgggcgaatag

DBGET integrated database retrieval system