Gordonibacter pamelaeae: GPA_06110
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Entry
GPA_06110 CDS
T02609
Name
(GenBank) RNAse III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
gpa
Gordonibacter pamelaeae
Brite
KEGG Orthology (KO) [BR:
gpa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gpa03019
]
GPA_06110
03009 Ribosome biogenesis [BR:
gpa03009
]
GPA_06110
03036 Chromosome and associated proteins [BR:
gpa03036
]
GPA_06110
Enzymes [BR:
gpa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
GPA_06110
Messenger RNA biogenesis [BR:
gpa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GPA_06110
Ribosome biogenesis [BR:
gpa03009
]
Eukaryotic type
90S particles
RNase
GPA_06110
Prokaryotic type
rRNA processing factors
GPA_06110
Chromosome and associated proteins [BR:
gpa03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
GPA_06110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
CBL03524
UniProt:
D6E727
LinkDB
All DBs
Position
complement(596601..597446)
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AA seq
281 aa
AA seq
DB search
MILTEEQEQKLARAQEILDYRFDSEHLLLSAITHPSATEGKSVKYSYERLEFLGDSILGA
IVAAIAFHRFHDLDEGGLTRIKVALVSGASLSDVADRLGFADVIVFGSSETGTGKRGLHS
ALENVYEAVVAALYLDGGIGAAQEFVERTLIPRMSLDMAREPENPKSALQEKLQEDGITP
TYKLVETQGPPHDRTFVAQVFAGTQGLARGTGRTKKEAESQAAKSTLARLGEFFGLGVDE
ETRAEKAEAAKLAKAEKAAARAEEKARKKSERAQAKQRKQG
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgatattgaccgaagagcaagaacagaagctcgccagagcgcaagagatactcgactac
cgcttcgatagcgagcacctcctgctctctgccatcacccacccctcggcaaccgagggc
aaatccgtcaagtactcctacgagcgccttgagtttttgggcgacagcatcctgggagcc
atcgtggcggccatcgcgttccaccgtttccacgacctggacgagggcgggctcacgcgc
atcaaggtggcgctcgtgtcgggcgcgagcctgtcggacgtggccgaccgtctgggcttc
gcggacgtcatcgtgttcggctcgtcggagacgggcacgggcaagcgcggcctgcactcc
gcgctggagaacgtgtacgaggccgtggtggcggcgctctacctggacggcggcatcggg
gccgcgcaggagttcgtggagcgcacgctcatcccgcgcatgtcgctggacatggcgcgc
gagccggagaaccccaagagcgccctgcaggagaagctgcaggaggacggcatcacgccc
acgtacaagctcgtggagacgcaggggccgccgcacgaccgcacgttcgtggcgcaggtg
ttcgccggcacgcagggcctggcccgcggcaccggccgcacgaagaaggaggccgagagc
caggcggccaagagcacgctcgcgcgcctcggcgagttcttcgggctgggcgtggacgag
gagacgcgcgccgagaaggccgaggcggccaagctggccaaggccgagaaggcggcggcg
cgcgccgaggagaaggcgcgcaagaagagcgagcgcgcccaggccaagcagcgcaagcag
gggtag
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integrated database retrieval system
