Gordonibacter pamelaeae: GPA_12890
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Entry
GPA_12890 CDS
T02609
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
gpa
Gordonibacter pamelaeae
Pathway
gpa00470
D-Amino acid metabolism
gpa00550
Peptidoglycan biosynthesis
gpa01100
Metabolic pathways
gpa01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
gpa00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GPA_12890
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GPA_12890
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
GPA_12890
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gpa01011
]
GPA_12890
Enzymes [BR:
gpa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
GPA_12890
Peptidoglycan biosynthesis and degradation proteins [BR:
gpa01011
]
Precursor biosynthesis
Amino acid ligase
GPA_12890
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp
ATP-grasp_3
RimK
GARS_A
ATPgrasp_ST
ATP-grasp_4
ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID:
CBL03934
UniProt:
D6E887
LinkDB
All DBs
Position
1298213..1299160
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AA seq
315 aa
AA seq
DB search
MVACVDPQHCHVALLVGGISGEREVSLASGEGAHQALTEAGFQVTTLDPADKDDLKTLID
GGFDVAFICLHGKYGEDGTLQGMLEMIGLPYIGSGVWSSALAMDKVKSKVFYQAAGISTP
PSITLGVNDTVDVEEIVGSLGERCVVKSATEGSALGVFIVEGHDAIQEAIEKARELDNEI
LVERYIKGKELTVAVIGNDNPRALPIIEIVPVNDFYDYEAKYKPGASQHLCPAPLSEETT
RQIQNMAVQAHKALECAGVSRSDFILDDEGDWWILETNTIPGMTGTSLLPDAARAAGISF
PELCTMLIEFALEKK
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggttgcatgcgttgacccccagcattgccatgttgcgctgctcgtaggcggcatcagc
ggggagcgtgaagtatcgctcgcgtcgggcgaaggagcccatcaggctttgacggaggca
ggttttcaggtgacgacgcttgatcctgctgataaagacgacctgaaaacgcttatcgac
ggaggattcgatgtggcattcatctgcttgcacggcaagtatggggaagatggaacgctg
cagggaatgctcgagatgatcgggcttccttatattggctcgggtgtttggtcgagcgcc
cttgccatggacaaggtgaagtctaaggttttctaccaggcagccggaatttcgacgcct
ccatcgatcacgctgggtgtcaacgacactgtcgacgttgaggagatcgtcggcagcctt
ggggaacgttgcgtggtaaagtctgctacggaaggaagcgctctaggcgtttttatcgtc
gaggggcacgatgctatccaggaagcgatcgaaaaagcccgagagctcgataatgagata
ttggttgaacgctatataaaaggtaaggagctgaccgtggctgttatcggcaacgataac
ccgcgagcccttccgattatcgagatcgttccggtaaacgacttctatgattacgaagcg
aaatacaagccaggtgcttcgcagcatctttgtccggcgcctctgtcggaggagacgacg
aggcagattcagaatatggcggtgcaagcgcataaagccctcgaatgtgcaggcgtttcg
cgatcggacttcattttggatgacgaaggggactggtggatactcgagacgaacaccatc
ccgggcatgacgggcacctcgctgcttcctgatgcagcacgggccgccggaatatcgttt
cccgaactatgcacgatgctgatcgaattcgcgctggagaagaaatag
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