Gordonibacter pamelaeae: GPA_13450
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Entry
GPA_13450 CDS
T02609
Name
(GenBank) Type IV secretory pathway, VirD4 components
Organism
gpa
Gordonibacter pamelaeae
Pathway
gpa03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
gpa00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
GPA_13450
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GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
CBL03979
UniProt:
D6E8D2
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Position
complement(1357944..1359785)
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AA seq
613 aa
AA seq
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MTAARVAAAALASIAAFLLGNSYAACLLSLPGNPASNLTEAAKLLPSFLLGHGPLSLEAA
ALATGLVAACAVWCAWAWSLTHGSPERQGEEHGSARWGTAREGRRFMNLEDPDRNIVLTK
HFGMAMDRPDHDRRYERNRNVLVVGGSGSGKTRGFFEPNIMQLNSNYLVTDPKGETLPRM
GHMLEAAGYRILAFNTVDFSKSLHYNPLAYVRDEADILEFVSCLIENTTGDREHAGDPFW
ENAERLLYVALIGYLVYRCPPEDRSLSGVVTLLSLAKAKESDESYRSPLDLLFEEVETGM
RCVAAVGGSGQGFDPTRRASYDPAGSCRWVKVAEPVPVDSDFALLHYKMFKDAAGKTLKS
ILVSCNTRMEPFAIPQVRELVSRDEMELDRLGDAEGRRAVFAVMSDTSSLYSFLFSIMLW
QTMSILCKRALVEYGGALPVPVTLLMDEFANIGRLPDVERMVAVVRSRNISMAFGLQSLS
QLKAAYKDNAATIVDCCDTLLFLGGKSNETAKEISESVGKETVSTVTWNESRGQSASSTR
NWNILERDLVQPSEVARLPRDEAIVLIAGANPLKDRKFDIEDHRRWSEVYPGHPGASHHL
PFDYSEYMERRDV
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgcacgggtcgcggcggcagccctggcctccatcgccgccttcctcctcggg
aactcgtacgccgcatgcctgctctcgcttccgggcaaccccgcgtccaacctcacggaa
gcggccaagctccttccttcctttctgctaggccacggccccctctcgctcgaggctgcc
gcgctcgcgacggggctcgtggccgcctgcgccgtgtggtgcgcctgggcatggtcgctc
acgcacggaagcccggagcgacagggcgaggagcacggcagcgcccgctggggcaccgcc
cgcgagggcaggcgattcatgaatctcgaggaccccgacagaaacatcgtcctcacgaag
cacttcgggatggcgatggaccggcccgaccacgaccggcgctacgagcgcaaccggaac
gtgctcgtggtgggcggctccggctccgggaagacgagagggttcttcgagcccaacatc
atgcagctgaactcgaactacctcgtgaccgacccgaagggcgagacgctgccccggatg
gggcacatgctcgaagctgcgggatacaggatactggcgttcaatacggtcgacttctcc
aagtccctccactacaaccccctggcgtacgtccgcgacgaagcggacatcctcgagttc
gtgtcctgcctcatagagaacacgaccggagaccgcgagcacgcgggagaccccttctgg
gagaacgccgagaggctcctctacgtggcgctcatcgggtacctggtgtaccgctgcccg
cccgaagaccgctcgctgtcgggggtggtcaccctgctctccctcgcgaaggcgaaggaa
tcggacgagtcgtaccgcagcccgctcgacttgcttttcgaggaggtggagaccgggatg
cgctgcgtcgcggcggtcggagggagcggccagggtttcgacccgacgaggagggcctcc
tacgacccggcaggctcctgccggtgggtcaaggtcgccgagcccgtccccgtcgactcg
gacttcgccctcctccactacaagatgttcaaggacgcggcgggaaagaccctgaagtcg
atactggtctcctgcaacacgcgcatggagcctttcgccataccccaggtgcgcgagctc
gtcagccgcgacgagatggagctcgaccggctcggcgacgccgaggggagacgcgcggtg
ttcgccgtcatgtccgacacctcctccctctactcgttcctgttctcgatcatgctctgg
cagacgatgagcatcctctgcaagcgcgccctcgtcgagtacgggggcgcgcttcccgta
ccggtgacgctgctcatggacgagttcgccaacatcgggcggctgcccgacgtcgagcgg
atggtagcggtcgtgcgcagccgcaacatctcgatggcgttcggactccagtcgctctcc
caactcaaagctgcctacaaggacaacgcagcgacgatcgtcgactgctgcgacaccctg
ctgttcctcggcgggaagtcgaacgagacggcaaaggagatctccgagtcggtgggaaag
gagaccgtgtcgaccgtcacctggaacgagagccgcggccagtccgcctcgtcgacccga
aattggaacatcctcgagcgagacctcgtgcagccctccgaggtggcgaggctgccccgc
gacgaggcgatcgtcctcatcgcaggggcgaacccgctgaaggatcgcaagttcgacatc
gaggatcaccggaggtggagcgaagtgtacccagggcaccccggggcgtcgcaccacctg
cccttcgactactcggaatacatggaaaggagagatgtctga
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