Gordonibacter pamelaeae: GPA_24760
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Entry
GPA_24760 CDS
T02609
Name
(GenBank) Holliday junction DNA helicase subunit RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
gpa
Gordonibacter pamelaeae
Pathway
gpa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GPA_24760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpa03400
]
GPA_24760
Enzymes [BR:
gpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GPA_24760
DNA repair and recombination proteins [BR:
gpa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GPA_24760
RecFOR pathway proteins
GPA_24760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
NTPase_1
AAA_14
AAA_22
RNA_helicase
nSTAND3
AAA_18
AAA_2
Rad17
TsaE
AAA_3
NB-ARC
AAA_33
IstB_IS21
AAA_28
Resolvase
AAA_17
AAA_25
Motif
Other DBs
NCBI-ProteinID:
CBL04619
UniProt:
D6EA72
LinkDB
All DBs
Position
complement(2470900..2471967)
Genome browser
AA seq
355 aa
AA seq
DB search
MAHDDIEIEGLGYVADGADAASVPPRAVTAELTEDDLVLDRSLRPKRLGDYLGQTKVKES
LAILIEAARARGDVVDHILFSGPPGLGKTTLATVVANELGASIRTTSGPAIERTGDLAAI
LTNLEEGDVLFIDEIHRLNRMVEEVLYPALEDFALDIVVGKGPAARSIRLDLPHFTLIGA
TTRTGLLTGPLRDRFGMVFRLAYYTPEELGSIVCRSAAILGVDIAEDGALEIARRSRGTP
RLANRLLKRVRDWAQVRGDGTIDEDVAAQALSFFEVDALGLDAVDNRILELLAVQFGGRP
VGLSTLASALSEDPDSLEDVYEPFLMQQGLMVRTPKGRQATPRAYEHLGIALPPA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacgacgacatcgagatagagggcctgggctacgtggccgacggcgcagacgcg
gcgtcggtgccgccgcgtgccgtgacggccgagctcacggaggacgacctcgtcctcgac
cgcagcctgcgcccgaagcgattgggcgactacctgggccagacgaaggtgaaggaatcg
ctcgccatcctcatcgaggcggcgcgggcgcgcggcgacgtggtcgaccacatcctgttc
tcgggccccccgggcctgggcaagaccacgctcgccaccgtggtggccaacgagctgggc
gccagcatccgcaccacgagcggccccgccatcgagcgcacgggcgacctggccgccatc
ctcacgaacctcgaggaaggcgacgtgctgttcatcgacgagatacaccgcctgaaccgc
atggtggaggaggttctctaccccgcgctcgaggacttcgcgctggacatcgtggtgggg
aaggggccggccgcgcgctccatcaggctcgacctgccgcacttcacgctcatcggcgcc
acgacgcgcacggggctgctcaccgggcccttgcgcgaccgcttcggcatggtgttccgg
ctggcatactacacgcccgaggagctgggctccatcgtgtgccgctctgcggcgatcctc
ggggtggacatagccgaggacggcgcgctggagatcgcgcggcgtagccgtggcacgccg
cgtctggcgaaccgcctgctcaaacgtgtgcgcgactgggcgcaggtgcgcggcgacggc
acgatcgacgaggacgtggccgcgcaggccctaagcttcttcgaggtggacgcgctcggc
ctggatgccgtggacaaccgcatcctggagcttctagccgttcagttcggcggccggccc
gtggggctctcgacgctcgcctcggcgctctcggaggacccggactccctcgaggacgtc
tacgagcccttcctcatgcagcagggcctcatggtgcgcaccccgaagggccgccaggcc
acgccgcgcgcctacgagcacctgggtatcgccctcccgcctgcctga
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