Gordonibacter pamelaeae: GPA_30380
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Entry
GPA_30380 CDS
T02609
Name
(GenBank) Small-conductance mechanosensitive channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
gpa
Gordonibacter pamelaeae
Brite
KEGG Orthology (KO) [BR:
gpa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gpa02000
]
GPA_30380
Transporters [BR:
gpa02000
]
Other transporters
Pores ion channels [TC:
1
]
GPA_30380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
dCache_1
MS_channel_1st
MS_channel_3rd
sCache_3_2
VP9
PAS_4
Pex24p
Motif
Other DBs
NCBI-ProteinID:
CBL04938
UniProt:
D6EB41
LinkDB
All DBs
Position
3055780..3058851
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AA seq
1023 aa
AA seq
DB search
MSRKLKVKIAVLVLVAAASMAVMGVLLSMMQTELSLDGYASEMQQESDALEGLLTLADEG
VEQNTVTFDEIYQSKAASVAFMANNDAGFAATDAKMVEYQDLLGVDNVLVVSRDGSIVAK
AQDTPANFAYARFNQLRTVFDDGKPSAAVEVELPEQNWLMRYYAARIDDGSMVVVEQGPE
ELRQLVEDTGLTKSVLKDIAIGQHGYVFAVSAQDYLVEYHPNDHLVGTDAIDGGIDVADL
EDGSLAWMELAGESLYGQVSKIGDTYYIAAVPESDMAATRNITVGVILFIFFAVMAVVIM
YGIFVMREDEREGRDPEDYRAVGPLRYNKVVGRKAAVLSFVGFLAVLGVSFYMQTLFALS
SQSVANNERAAEVVETTQRTQARMDELVSQYDERYLGKVRVAGYILDQNPSLANRDDLQR
LADVLMIQYVFTYDGNGVMTATNSSYANFTLSEDPEDQSSEFRKLLQGADSVVQEAQPDE
ISGQLRQYIGVPLHDEAGTVNGAVQIGIRTTRLENLLETVTVDSVLGGVKVGSEGFAFAV
SKDDRTFAYFPDQRLVGKDALEHGMTENQLKGGYCDYLTVEGTTYYVSSAEAENYFLYVA
DTEGELMAERVPLTVATGGVALVCLVVIFLLLAFEPRGSVTVAKAPVEADARMIDVKMPS
GRVAKTESAASRWIARSFKWGEKTAEQKTATVVRWLVGVFVIAVFAAVVFRESIFGQGSI
FSYILGGNWERGVNVFALTACIMFVCVALTVVALVQKLLNLLATVLGARGETVCRLLGSF
IKYATIIGMAYYCLMLVGVDTTTLLASAGILSIAISFGAKELVSDILSGLFIIFEGEFRV
GDIIKVGDWRGTVVEIGVRTTKVEDGSQNIKVIRNSDISNVINMTKETSYASCDVGIEYG
ESLERVENILSKELPNIRKRLPAIIDGPFYKGVVELGDNSVTIRIVVQCSESDRLQLERD
LNREMKLIFDKYDISIPFPQVVINQPTEFKKATAAEQRSADQFNAQQKAAARELGNDEDD
ETR
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagaaaactcaaagtcaagatcgccgtcctcgttttggtggcagccgcgagcatg
gcggtcatgggcgtgctgctgtccatgatgcagaccgagctgtcgctggacggctacgcg
agcgagatgcagcaggagtccgacgcactggagggcctgttgacgttggcagacgaaggc
gtggagcagaacaccgtcaccttcgacgagatataccagtccaaggcggcgagcgtggcc
ttcatggcgaacaacgacgccggcttcgcggcgaccgatgcgaagatggtcgagtaccag
gaccttttgggcgtggacaacgtgctggtggtgtcgcgcgacggctccatcgtcgcgaag
gcgcaggacacccccgcgaacttcgcgtatgcgcgcttcaaccagctgcgcaccgtgttc
gatgacggcaagccctccgcggccgtggaggtggagctgcccgaacagaactggctcatg
cgctactacgctgcccgcatcgacgacggttccatggtggtggtcgagcagggccctgag
gagctgcgccagctcgtggaggacacgggcttgacgaagagcgtgctcaaggatatcgcc
atcggccagcacggctacgtgttcgcggtgtcggcgcaggactacctggttgagtaccac
ccgaacgaccatcttgtgggcaccgacgccatcgacggcggcatcgacgtggccgacctc
gaggacggttcgctcgcgtggatggagcttgccggcgagagcctgtacggccaggtgagc
aagatcggcgacacctactacatcgccgccgtgcctgagagcgacatggccgccacccgc
aacatcacggtgggagtgatcctgttcatcttcttcgcggtcatggccgtggtcatcatg
tacggcatcttcgtcatgcgcgaggacgagcgcgaggggcgcgaccccgaggactaccgc
gccgtcgggccgctgcgctacaacaaggtggtcgggcgcaaggcggcggtgctctcgttc
gtgggctttctggctgttctgggcgtatcgttctacatgcagacgctgttcgcgctatcg
tcccaatccgtggccaacaacgagcgcgccgccgaggtggtcgagaccacccagcgcacc
caagcgcgcatggacgagcttgtcagccagtacgacgagcgctatctgggcaaggtgcgc
gtggccggctacatcctggaccagaacccctcgcttgcgaaccgcgacgacctgcagagg
ctggccgacgtcctcatgatccagtacgtgttcacgtacgacgggaacggcgtgatgacc
gcgacgaactcctcctacgcgaacttcaccttgagcgaggaccccgaggaccagtcctcc
gagttccgcaagctgctccagggcgcggactcggtggtgcaggaagcgcagcccgacgag
atatccgggcagctgcgccagtacatcggcgtgcctctgcacgacgaggccggcactgtg
aacggcgccgtgcagatcggcattcgcacgacgcgcctggagaatctgctggagaccgtt
accgtggacagcgtgctgggtggcgtgaaggtgggctccgaagggttcgccttcgccgtg
agcaaggacgaccgcaccttcgcgtacttccccgaccagcgccttgtcggcaaggacgcg
ctggagcacggcatgacggagaaccagctgaagggcggctactgcgactacctcaccgtg
gaggggacgacgtactacgtctcatcggccgaggcggagaactacttcctgtacgtcgcc
gacaccgagggcgagctcatggccgagcgcgtgccgctcaccgtggccacgggcggcgtg
gccctcgtatgcctcgtggtgatattcctgctgctggccttcgagccgaggggcagcgtg
actgtggccaaggcgccggtcgaggccgacgcgcgcatgatcgacgtgaagatgccgagc
ggacgcgtggccaagaccgagtcggccgccagccgctggatcgcccgttcgttcaagtgg
ggcgagaagacggccgagcagaagacggccacggtggtgcgctggctcgtgggcgtgttc
gtgatcgccgtgttcgcggccgtggtgttccgggagagcatcttcggccagggctcgatc
ttctcctatatcctgggcggcaactgggagcgcggcgtgaacgtgttcgccctcacggcg
tgcatcatgttcgtgtgcgtggcgctgaccgtggtcgcgctcgttcagaagctgctgaac
ctgctggccaccgtgctgggcgcgcgcggcgagaccgtgtgccgccttctgggcagcttc
atcaagtacgccaccatcatcggcatggcgtactactgcctcatgctggtgggcgtggac
accaccacgcttctggcctcggccggcatcctgtccatcgccataagcttcggcgcgaag
gagctggtgagcgatatcctctccggcctgttcatcatcttcgaaggcgagttccgcgtg
ggcgacatcatcaaggtgggcgactggcgcggcaccgtggtggagatcggcgtgcgcacc
accaaggtggaggatggctcccagaacatcaaggtcatccgcaacagcgacatcagcaac
gtgatcaacatgaccaaggagacgtcctacgcctcgtgcgacgtcgggatagagtacggc
gagtcgctcgagcgcgtggagaacatcctgtccaaggagctgccgaacatccgcaagcgc
cttcccgccatcatcgacgggccgttctacaagggcgtcgtggagctgggcgacaacagc
gtgaccatccgcatcgtggtgcagtgctccgagagcgaccgcctgcagctggagcgcgac
ctgaaccgcgagatgaagctgatcttcgacaagtacgacatcagcatcccgttcccgcag
gtggtgatcaaccagcccaccgagttcaagaaggcgaccgcagccgagcagcgcagcgcc
gaccagttcaacgcgcagcagaaggccgccgcccgggagctgggcaacgacgaggacgac
gagacgcggtag
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