KEGG   Gordonibacter pamelaeae: GPA_31120
Entry
GPA_31120         CDS       T02609                                 
Name
(GenBank) Type I site-specific restriction-modification system, R (restriction) subunit and related helicases
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
gpa  Gordonibacter pamelaeae
Brite
KEGG Orthology (KO) [BR:gpa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:gpa02048]
    GPA_31120
Enzymes [BR:gpa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     GPA_31120
Prokaryotic defense system [BR:gpa02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   GPA_31120
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD Helicase_C HSDR_N Turandot
Other DBs
NCBI-ProteinID: CBL04986
UniProt: D6EB89
LinkDB
Position
complement(3140028..3142700)
AA seq 890 aa
MAACGVVVREWQTTTGPCDYLIFIDGTPCGLIEAKEHDKGEKLTAVAEQTRRYAESEFKY
APTDIDIRFAYEATDVLTRFCDYHDKDYRSREIFSFHRPEQLRAWLKDSDTIRNRLKSFP
AFDTTGFRKCQVNAIVNLEKSFGENRPRALIQMATGAGKTYTAITNVYRLLKFAKAKRIL
FLVDTKNLGEQAEEEFRKYKPTDDARLFPELYNVCRLTSSQIPNGSNVCISTIQRMYSIL
KGKELDEADEESSPNEGRIVGEPRDVEYNSAYPPEYFDFIIIDECHRSIYNVWQQVLDYF
DAFLIGLTATPDKRTYSFFNQNVVSEYTHEEAVIDGVNVGGDTYIIETDVSKNGATITER
LVEKRDRLSREKRWEQNDEDLEYDKGKLDRDVVNPSQIRTIIREFRDKVTTVMFPGRKEI
PKTLIFAKTDSHADDIINIVREEFGRGNEFCKKITYNAEEDPKSVLAAFRNEFYPRVAVT
VDMIATGTDVKALECLVFMRDVRSRNYFEQMLGRGRRTLGHDDLARVSPSATTNKCRYVV
VDCVGVTKSLKTETRQLDRKPSVSLKELMMSVAMGARDDDTVTSLAGRLLRLAAVMDNGE
RKKAAELAGGASVNDIARDMLDAFDEDRIAKEAGLIFRDGAREATEEERAKLADAQSRLV
EKAIKPMFSAELRNYLENARKAHDQVIDNENLDAVISSGWDTDREDHAKEVIQTFRQFLA
DNRDELDALQIIYGQTYKQRPITLRMVKAVHDALKTSPYGLSCDMVWHAYEVAGAPIATA
RSAVGKLMDIISVIRFELGQEKILRPFEAGVAERFKSWVFSKNAGHGQFTEEQMDWLRMI
RDHISTSGSVSSDDLDLSPFGEKGGLGRFYVLFGDKYQDVLDDMNYALVA
NT seq 2673 nt   +upstreamnt  +downstreamnt
atggcggcgtgtggtgtcgttgtccgtgaatggcaaacgaccaccggcccatgtgattac
cttatctttatcgacggcaccccttgcgggctgattgaagctaaagaacacgacaagggc
gagaagctcacggccgtagccgagcagacaagacgctacgccgagagcgaattcaagtat
gcccccactgatattgacattcgttttgcctacgaggcgactgatgtcttaacccgtttt
tgcgactatcacgataaggattatcgttctcgcgagattttttccttccatcgaccggag
caacttcgcgcttggctgaaggattccgataccatccggaacaggctcaagtctttcccc
gcctttgataccactggttttcgtaagtgccaagtgaatgcgattgttaatcttgaaaag
tcgttcggggagaaccgtccacgcgcgttaatccaaatggccactggtgctggcaagacg
tacaccgccatcaccaacgtttaccgcctgctcaaatttgccaaggccaagcgcatccta
tttcttgtcgacacgaagaacctaggggaacaggccgaggaggagttccgcaagtacaag
cccaccgacgatgcgaggttatttcccgagctttacaacgtatgtcgcctgacctcttca
cagattcccaatggctccaacgtatgcatcagcaccatccaacggatgtactccatcctc
aagggcaaagagcttgacgaggcagacgaggaatcttcccctaatgaaggtcgcatcgtc
ggcgagccacgcgatgttgagtacaactcagcttacccacctgagtatttcgatttcatc
atcatcgacgagtgtcaccgttctatctataacgtctggcaacaggttctcgattacttc
gatgcctttctcatcgggcttaccgctacgcccgacaagcgaacctactcttttttcaat
cagaacgtcgtgagcgaatacactcatgaagaggcggtcatagacggcgtcaacgtcggc
ggcgatacctacatcatcgaaactgatgtgagcaagaacggcgcgactatcaccgagcgt
cttgttgagaagagagaccgcctttcccgcgagaagcgatgggagcagaacgacgaggac
ctggaatatgacaagggcaagctagaccgcgatgtcgtcaatccgtcccagatacgcacc
atcatccgtgagttccgcgacaaggttacgacggtcatgttccccggtcgcaaggaaata
cccaagacgcttatctttgccaaaacagatagccacgcggacgacatcatcaacattgtg
cgcgaagaattcgggcgcgggaacgagttctgcaaaaagataacctataacgccgaagag
gaccccaagtctgtgcttgcggcattccgcaacgagttctacccccgcgtcgccgtaacc
gttgacatgatcgctaccggtaccgacgtcaaagctctcgagtgcctcgtcttcatgcga
gacgttcgctctagaaattacttcgagcagatgcttggtcgtgggcgtcgtacgctcggc
catgatgacctggctcgcgtttcgccgtcggcgacaacgaacaagtgccgctacgtggtt
gtcgattgcgttggcgtcacgaagagtctgaaaactgaaacaaggcagctcgacaggaaa
ccctccgtaagcctgaaagagctcatgatgagcgttgccatgggcgcgcgcgatgacgat
accgtcacctcgctcgccggccgtcttcttcgactcgccgccgtcatggacaatggcgag
cgaaaaaaggccgctgagcttgccggtggcgcctccgtgaacgacatcgctagagatatg
cttgacgctttcgacgaggacaggatagcaaaggaagccgggcttatctttagagatggt
gcccgagaagcaaccgaagaagagcgagccaagttggcagatgcccagtctcggcttgtc
gagaaggcaattaagccaatgttctctgccgagctgagaaactacctcgaaaatgcgcgc
aaggcgcacgaccaggtcatagataatgagaacctagatgctgtcatctcatccggttgg
gacaccgatcgcgaggaccatgccaaagaggtcatccaaacgttcagacaattccttgcc
gacaacagggatgagctggacgcgttgcagatcatctacggccagacctacaagcagcgc
cccatcacgctgcgcatggtcaaggccgttcacgatgcgttgaaaacgtccccctatgga
ctttcctgcgacatggtctggcatgcatatgaggtcgcgggcgcacccatcgctacggca
cgaagtgctgtgggcaagcttatggacatcatttccgttattcgattcgaactcggacag
gaaaagatcctaagacccttcgaggcgggcgtggcggagcgtttcaagagttgggtcttc
tccaagaacgcaggccacggccagtttaccgaagagcagatggattggctgcgtatgatt
cgcgaccatatctctacctcgggaagcgtgagctctgacgacctcgacttgtcacctttc
ggtgagaagggcggcctcgggcgtttctacgtcctgttcggcgataagtaccaagacgtt
ctcgacgacatgaactacgcgcttgtcgcataa

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