Gordonibacter pamelaeae: GPA_32360
Help
Entry
GPA_32360 CDS
T02609
Name
(GenBank) Predicted metal-dependent hydrolase with the TIM-barrel fold
Organism
gpa
Gordonibacter pamelaeae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidohydro_3
Amidohydro_1
SpoVS
Motif
Other DBs
NCBI-ProteinID:
CBL05047
UniProt:
D6EBF0
LinkDB
All DBs
Position
3263954..3265783
Genome browser
AA seq
609 aa
AA seq
DB search
MDQPGITCISRRSFIAGSALAFASLGFGLYGCAEPADNGAAHVNRGKAAKRADQYFENGT
IATVNDQDDIVEALAVKDGRIVFAGSAADGQAYKDVAGSVVDLQGSFVLPGLIEGHIHSG
SPDFFDFSLVGLSTAEEELAAIKEYVDAHPEKDTYLGYGYMASLYPGEELEKGPKKERLD
QISPDKPLLVYSFDGHGAWLNSKAFAYLGITPDTPSTPGGAIYKDADGGLWGTLADSAMS
LTSKYPVNQENVADGLAAFLQGLNALGYTSLFTPPGNGFFPVPYEGYQALADRDELTMRV
RGAGIVTSWQTDEDLAKLEELKKKYDGDALKVIAGKIFVDGVMDNESALLSEPYTDDPSS
YGETGWEQDALNQAVAAINRTGMLAHIHAIGDEAVTMGLDAIEYAEQNVPDDDERNAITH
LQLVKEGDVPRFAELEVTAVADPYWHFKEPQYWESKESPALGERAEKMYPMKSFADAGAT
LVSASDFPVTSNPNPFYAMQFGVTRNLVDGEPYGVPNITDMDDPAYLLWPEERVDIKRMI
RSFTADAAWALGLEGETGTLEPGKSADFIVVDQNVLDADPLAIKDTKVLATYLRGEKIFD
AAQATDPKE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggaccaacccgggatcacgtgcatctcgcgccgctccttcattgccggcagcgcgctc
gcgttcgcctcgctcggcttcggcctttacggctgcgccgagcccgccgacaacggcgcc
gcgcacgtcaaccggggaaaggcagccaaaagggccgaccagtacttcgagaacgggacc
atcgcgacggtgaacgatcaggacgacatcgtggaggccctggccgtgaaggacgggcgc
atcgtgttcgccggctcggcggccgacggccaggcatacaaggacgtggccggatcggtg
gtggacctccagggcagtttcgtgctgccgggcctcatcgaaggccatatccactcggga
tcgcccgacttcttcgacttcagcctcgtcggcctctccaccgccgaagaggagctcgcc
gccatcaaggagtacgtcgacgcgcatcccgagaaggacacgtacctgggctacggctac
atggccagcctctaccccggcgaggagctggagaaggggcccaagaaggagcgcctcgac
cagatcagccccgacaagccgctgctcgtgtactcgttcgacggccatggcgcgtggctg
aactcgaaggcgttcgcgtacctcggcatcacgcccgacacgccctccacgcccggcggc
gcgatctacaaggacgcggacggcggactgtggggcacgctggccgactccgccatgtcg
ctgacctcgaagtaccccgtcaaccaggagaacgttgccgacgggctggccgcgtttctg
cagggcctcaacgcgttgggctacacgtccctcttcacgccgcccggcaacggcttcttc
cccgtgccctacgagggctaccaggcgctcgcggatcgcgacgagctcaccatgcgcgtg
cgcggcgcgggcatcgtcaccagctggcagaccgacgaggacctggccaagctcgaggag
ctgaagaagaagtacgacggcgacgcgctcaaggtgatcgccggcaagatattcgtcgac
ggcgtgatggacaacgaatcggccctgctgtccgagccctacaccgacgacccctccagc
tacggcgagaccggctgggagcaggacgccctcaaccaggcggtcgcggccatcaaccgc
accggaatgctcgcgcacatccacgccatcggcgacgaggccgtgacgatggggctcgac
gccatcgagtacgccgagcagaacgtgccagacgacgacgagcgcaacgccatcacccac
ctgcagctcgtgaaggagggcgacgtcccgcgcttcgccgagctggaggtgacggccgtg
gccgacccctactggcacttcaaggagccgcagtactgggaatcgaaggaaagcccggcg
ctcggcgagcgcgccgagaagatgtacccgatgaagtcgttcgcggatgcgggcgcgacg
ctcgtctccgcctccgatttccccgtgacctcgaaccccaaccccttctacgcgatgcag
ttcggcgtgacgcgcaacctcgtggacggcgagccctacggcgtgcccaacatcaccgac
atggacgatcccgcctacctgctgtggcccgaagagcgcgttgacatcaagcggatgatc
cgcagcttcaccgccgacgccgcctgggccctgggcttggaaggcgagacgggcacgctt
gagcccggcaagtcggccgacttcatcgtggtggaccagaacgtcctcgacgccgacccc
cttgccatcaaggacacgaaggtgctcgccacctacctgcgcggcgagaagatcttcgac
gccgcgcaggctacggaccccaaggaatag
DBGET
integrated database retrieval system
