KEGG   Gordonibacter pamelaeae: GPA_35200
Entry
GPA_35200         CDS       T02609                                 
Name
(GenBank) Restriction endonuclease
  KO
K01156  type III restriction enzyme [EC:3.1.21.5]
Organism
gpa  Gordonibacter pamelaeae
Brite
KEGG Orthology (KO) [BR:gpa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:gpa02048]
    GPA_35200
Enzymes [BR:gpa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.5  type III site-specific deoxyribonuclease
     GPA_35200
Prokaryotic defense system [BR:gpa02048]
 Restriction and modification system (R-M system)
  Type III R-M system
   GPA_35200
SSDB
Motif
Pfam: RE_endonuc ResIII DEAD Beta-prop_BT_1020
Other DBs
NCBI-ProteinID: CBL05219
UniProt: D6EBX2
LinkDB
Position
complement(3559237..3562419)
AA seq 1060 aa
MKFKFKVQQYQTDAADAVASVFEGQPNQGASVYLRDLGRKPKRAQGEIDFGDESAEGYAN
APVALSGADILANVRAVQRRNQIPESEELFCGMGACQLDVEMETGTGKTYVYTKTMLELN
RLYGWCKFIVVVPSVAIREGVAKSLENTQEHFFSQYHKRIRFFIYDSDNLTELDSYSQSS
DVNCMVINMQAFNASMKEGAKNKAARIIFDERDEFSSRRPIDVIAANRPIVICDEPQKMG
KKGGATQKGIARFNPLFVLNYSATHKEKHDLVYALDALDAYNQKLVKRIEVKGFALKNMR
GTDGYLYLRDIVVSKNRAPEAVIEFKCMGSGGKVRKRTARFGEGDSIYDASGSTKLEAYR
GYTIASGNDGVVPPQDGRPGYVRFLDGSIGDDGRIYIGEVYGDSAADDMQRIQIRETILS
HLQKEEALLRRGIKCLSLFFIDQVAKYRDLSGNGETVGYGKIFEEEYEAIVSDRMKHPTQ
DDILDPSYAQYLGRFDARSVHSGYFSVDKKGNTVESKAEKKAEREDGIGINDDDAKRAYD
LILRDKERLLSFDEPVRFIFSHSALREGWDNPNIFQICTLKESGSETSKRQEVGRGMRLA
VDQDGNRQDAALLGPGEVHRVNLLTVIASESYETFVKDLQTDISKSLRERPKKVEMNLFS
GRDFVLDGETVSFTEEESKRVYKALYKCDLIDDDDKPTAEFRKAVEDGTFVEYFVAKLPE
EIADVAHAKAVEALVRSVYDTHALDGMIGRAQEKISENTLTDNFAKREFKELWARINRKH
AYTVSFSDDELRRKSIERINSDLRVSKLQYTLTVGGQKSQATRDEVQGGSSFGRTQTETR
DVDAGTASVNVTYDLVGEVAQAAAITRRSAATILAGIDPNVFELYRVNPEEFIKKAAALI
VSEKATMVVEHISYHEIDDVYDEAIFTGRMPDNASKAYEAKKNIQRFVFPDSDGERRFAE
DMDAAAEVAVYAKLPRTFQIPTPVGNYAPDWAIAFKEGSVRHVFFVAETKGTMDTLELSG
VENAKIACAKKLFNEMSTSDVRYHNVATYEDLLEVMGRMS
NT seq 3183 nt   +upstreamnt  +downstreamnt
atgaagttcaagttcaaagtacaacagtatcaaaccgacgccgcagacgcggtggcctcg
gtcttcgaggggcagcccaaccagggtgcctccgtctacctgcgcgatctgggccgcaag
cccaagcgcgcgcagggcgagatcgacttcggcgacgagagcgccgagggctacgccaac
gcgcccgtcgcgctttcgggcgccgacatactggcaaacgtgcgcgcggtgcagcgacgc
aaccagatccctgagtcggaggagcttttctgcggcatgggggcttgccagctggacgtc
gagatggagacgggcaccggcaagacctacgtctacaccaagacgatgctcgagctcaac
cgcctgtacggctggtgcaagttcatcgtggtggtgccgtcggtcgccatccgcgagggc
gtggccaagagcttggagaacacccaggagcacttcttctcccaataccacaagaggatc
aggttcttcatatacgactcggacaacctgaccgagctggattcgtactcccaatcgagc
gatgtcaactgcatggtcatcaacatgcaggcgttcaacgcgtcgatgaaggagggcgcc
aagaacaaggcggcgcgcatcatcttcgacgagcgcgacgagttcagcagccgcaggccc
atcgacgtcatcgctgcgaaccgccccatcgtcatctgcgacgagccccaaaagatggga
aagaagggaggcgcgacccagaagggcatcgcccgcttcaaccctctgttcgtgctgaac
tattcggcaactcacaaggagaagcacgacctggtgtatgccctggacgccctggacgcc
tacaaccagaaactcgtcaagcgcatcgaggtgaagggcttcgccctcaagaacatgcgc
ggaaccgacggctacctgtacctgcgcgacatcgtggtgtccaagaaccgcgcaccggag
gccgttatcgagttcaagtgcatggggtctggcggcaaggtgcgcaagaggaccgcgcgc
ttcggcgagggcgacagcatctacgacgccagcggctcgacgaagctcgaagcgtaccgc
ggctacaccatcgcgagcggcaacgacggcgtggtcccgccccaggatggacgtccaggc
tacgtgcgcttcctggacggctctatcggggacgacgggcgcatctacatcggcgaggtc
tacggcgactccgccgccgacgacatgcagcgcatacagatacgcgagacgatcctgagc
cacctgcaaaaggaggaggcgctgcttcgccgcggcatcaagtgcctgagccttttcttc
atcgaccaggtggcgaagtaccgcgatctctccggcaacggagaaaccgtgggctacgga
aagatcttcgaggaggagtacgaggccatcgtctccgacagaatgaagcacccgacccag
gatgacatccttgacccctcgtacgcgcagtaccttgggcgattcgacgcgcgctcggtg
cactccggatacttctcggtggacaagaagggcaataccgtcgaatcgaaggccgagaag
aaggcggagcgcgaggatggcatcggcatcaacgacgacgacgcgaagcgcgcctacgac
ctgatcttgcgcgataaggagcgcctgctttcgttcgatgaacccgtacgcttcattttc
agccactcagcgctgcgcgagggctgggacaacccgaacatcttccagatctgcacgctc
aaggaatcgggctccgagacgagcaagcgccaggaagtcggccgcggcatgcgcctggct
gtcgaccaggacggcaaccgtcaggacgccgccctgctgggacccggcgaggtgcatcgc
gtgaacttgctcaccgtgatagcgtcggagagctacgagacgtttgtgaaggatctgcag
accgacataagcaagagcctgcgcgagcgcccgaagaaggtggagatgaacctgttcagc
gggcgcgacttcgtgctcgacggcgagacggtctccttcaccgaggaggagtcgaagcgc
gtatacaaagccctctacaagtgcgacctcatcgatgacgacgacaagccgaccgctgag
ttccgcaaggcagtggaggatggcaccttcgtggagtacttcgtcgcgaagctgcccgag
gaaatcgccgacgttgcccacgccaaggctgtcgaagcgctggtgagaagcgtctacgac
acgcacgcgctcgacggcatgatcgggcgcgcccaggagaagatttccgagaacacgctg
actgacaacttcgccaagcgcgagttcaaggagctgtgggcgcgcatcaaccgcaagcac
gcctacacggtcagcttctcggacgacgagctgagacgcaagtcgatagagcgcatcaac
agcgacctgcgcgtgagcaagctgcagtacaccctgacggtcggcgggcaaaagtcacag
gcaacgcgcgacgaggtgcagggcggctcgtcgttcggccgcacgcagaccgagacccgc
gacgtcgacgctggcaccgcgtccgtgaacgtaacctacgacctcgtgggcgaggtggcg
caggccgctgccatcacgcgcaggagcgccgcgacgattctcgccggcatcgaccccaac
gtgttcgagctctaccgcgtgaaccccgaggagttcatcaagaaggccgctgcgctcatc
gtgtcggagaaagcgacgatggtcgttgaacacatcagttaccacgagatcgacgacgtc
tatgatgaggcaatcttcaccgggcgcatgcctgacaacgcgagcaaggcatatgaggcg
aagaagaacatccagcgcttcgtgttccctgactcggatggagagcgcaggttcgccgag
gacatggatgccgccgctgaggtagcggtctacgccaagctgcctcgaacgttccagatc
cccacaccggtgggcaactacgcccccgactgggcaattgctttcaaagaaggcagcgtg
cgccatgtgttcttcgtcgccgagaccaagggcaccatggacacgctggagctctccgga
gtggaaaacgccaagatcgcttgcgcgaagaagctcttcaacgagatgagcaccagcgac
gtgcgctaccacaacgtggcaacgtacgaggacctgctcgaggtgatgggcaggatgagc
tag

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