Gamma proteobacterium HdN1: HDN1F_00340
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Entry
HDN1F_00340 CDS
T01300
Symbol
oprF
Name
(GenBank) outer membrane porin f precursor
KO
K03286
OmpA-OmpF porin, OOP family
Organism
gpb
Gamma proteobacterium HdN1
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gpb02000
]
HDN1F_00340 (oprF)
Transporters [BR:
gpb02000
]
Other transporters
Pores ion channels [TC:
1
]
HDN1F_00340 (oprF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
OprF
DUF748
TSP_3
Motif
Other DBs
NCBI-ProteinID:
CBL43617
LinkDB
All DBs
Position
48464..49525
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AA seq
353 aa
AA seq
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MRNLKIKSLALGVAAAALVGGVAHADQILINPGVAWYMNDADRGLKNREAYVLGLEYIYA
DRFGVEVSGSFSQPKWKAANRGLGEDPDHIAYDANLLYYFGKSGDRLRPYAAFGVGDGRW
EFDNTDWVETDVNLGGGVRYELAKNVSLRADARVVHGTDESTFDGRALLGVSYAFNVGPD
RTKKAAAPVAEPAPVVEEPRDSDGDGVLDSADRCPNTRAGAKVDANGCELVKTVMESIRL
NVQFATGSSAVAPRYHAEVQKIADFMKKYPDLTVTIEGHTDNTGGAALNERLSSARANSV
REELVNRFGVAANRVTSVGYGPSRPVASNATAAGRQENRRVVAVLEKEVSAGQ
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaatctgaaaatcaaatctctggcgttgggggttgctgctgcagcactggtgggt
ggtgttgcgcacgcggatcaaattttgatcaacccgggcgttgcttggtacatgaacgac
gcggatcgcggcctcaagaacagagaagcctatgtgttaggtcttgaatacatctacgca
gaccgcttcggggtagaagtgtcgggctcgttctctcagccgaagtggaaggctgcgaac
cgtggcttgggcgaagatccagatcatattgcttatgacgctaaccttctctattacttc
ggtaaatcaggtgatcgtttgcgcccctacgcagcgtttggcgtgggcgacggccgttgg
gaattcgacaacaccgattgggttgaaaccgacgtaaacctcggcggcggtgtgcgctat
gaactggcgaagaacgtcagcctgcgcgcggatgctcgcgttgtgcacggcacagatgaa
agcacttttgatggccgcgctttgttgggcgtgagctatgcgtttaacgtaggcccagat
cgcaccaaaaaagctgctgctccggtagcagagccggctccagtagttgaagagccccgc
gatagcgatggtgatggcgttcttgattctgccgatcgctgcccgaacacccgcgcaggc
gctaaagtggatgcgaatggctgcgagctcgtgaaaacggtgatggaaagcattcgcttg
aacgtgcaattcgctaccggctcttctgctgttgcaccgcgctaccatgcagaagttcaa
aagattgcagacttcatgaagaagtatcccgatctgacggtgaccatcgaaggccacacc
gacaatactggcggtgcggctctgaacgaaaggctttccagcgctcgcgcgaactccgtt
cgtgaagagctggtgaatcgctttggtgttgcggcaaaccgcgttacctcggttggctat
ggcccgtcccgccccgttgcttcgaacgcaacggccgccggtcgccaagaaaaccgtcgt
gttgttgcagtgcttgagaaagaagtctctgctggtcagtaa
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