Gamma proteobacterium HdN1: HDN1F_00510
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Entry
HDN1F_00510 CDS
T01300
Name
(GenBank) D-ribose periplasmic binding protein precursor
KO
K10439
ribose transport system substrate-binding protein
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb02010
ABC transporters
gpb02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HDN1F_00510
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
HDN1F_00510
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gpb02000
]
HDN1F_00510
Transporters [BR:
gpb02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
HDN1F_00510
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Transket_pyr
Motif
Other DBs
NCBI-ProteinID:
CBL43634
UniProt:
E1VFP2
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All DBs
Position
complement(70945..72003)
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AA seq
352 aa
AA seq
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MRFFTPLLLLALLSLNAYAQTDAQAKTPWSIGVLYWSNTIAGQIAMRKGLEEEAEKINRE
AKSTGKRPIVLTSKIAGDGPQGIENQIQQMVQLVATKPDAIIVQPTDNAALAGPLIAANR
AGIPVIAYDQYISEGTLASFITSNNDQAGRLGGEYLASLFPDEKPMQLVLVEYPSVSSTV
ERLNGFLDALQERGQAYRILASFQAVQPEEGARAAHAILKQFPDKGSIDAIFTVNDGGGL
SVVDILAAAGRTEIVVATVDGDPASVANIKAKRLTRIDSAQFCGPLGATAMRTTYQVLLG
KKVSPQILIPSFPITTQTLTRYPGWAGPIPAAFQKPWPSRTPLWQNRLVEAP
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgagattttttacccctctacttttgcttgcccttctaagtctaaatgcttatgcacaa
acagatgctcaagcaaaaacaccgtggagtattggcgtgctgtattggtccaacaccatt
gctgggcaaatcgccatgcgcaaaggcttggaagaagaggcagaaaaaatcaaccgagaa
gcaaaatcgactggcaaaaggcccattgttctcaccagcaaaattgcaggcgatggcccc
caagggattgagaaccagattcagcaaatggttcagcttgttgcaaccaagcccgatgcc
atcatcgtgcagcctacagataacgcggcactcgcagggccattgattgcggcaaaccgc
gccggcattccggtgattgcgtatgaccaatacatttctgagggtacgctagcttccttt
attacctcgaataacgatcaagcagggcggctgggtggagagtatttggcatcgcttttc
cctgatgaaaaacctatgcaactcgtgctagtggaatatccctctgtatcctcaacggta
gaaaggcttaatggctttttagatgcgcttcaggagcgtggccaagcgtacagaatcctt
gccagcttccaggcagtgcaacctgaggagggtgctcgcgctgctcacgcaattctgaag
caatttcctgataaggggagtattgatgcaatctttacagtaaacgacggcggcggctta
agcgtggtagacatccttgccgctgcgggccgcaccgagattgtagtcgccaccgtggat
ggcgaccctgcatccgttgcgaatataaaagccaagcggcttacacgcatcgacagcgcc
caattttgtggcccactgggcgcaaccgccatgcgaaccacttaccaagtgctactaggt
aagaaagtaagtcctcaaattctgattcccagcttccccatcacaacccaaaccttaacg
cgctatcccggctgggcggggccaattcccgcagcgtttcaaaagccttggccttctcgc
acaccgctctggcaaaacagattggtggaggcaccgtga
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