Gamma proteobacterium HdN1: HDN1F_00930
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Entry
HDN1F_00930 CDS
T01300
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase (DAP decarboxylase)
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb00300
Lysine biosynthesis
gpb00470
D-Amino acid metabolism
gpb01100
Metabolic pathways
gpb01110
Biosynthesis of secondary metabolites
gpb01120
Microbial metabolism in diverse environments
gpb01230
Biosynthesis of amino acids
Module
gpb_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
gpb_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HDN1F_00930 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HDN1F_00930 (lysA)
Enzymes [BR:
gpb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HDN1F_00930 (lysA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
CBL43676
LinkDB
All DBs
Position
complement(129917..131185)
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AA seq
422 aa
AA seq
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MSSAFHYQNHELHAEQVNLTQLAEQVGTPAYVYSRSAIEQQWLAFDRAFGAHPHLVCFAV
KANSNIAVLNLLARLGAGFDIVSEGELERVLRAGGDPKKVVFSGVGKQPAEMARALTVGV
RCFNVESESELHTLNQVAATLGVKAPVSLRVNPDVDAQTHPYISTGLKENKFGIDIDRAL
QVYRDASELPHINIVGVDCHIGSQLTQLAPFLDALDRVLVLVDALKAEGIALRHLDLGGG
LGVCYRNEQPPSPSDYVQALLTRLGQHPEFGKQGIEIILEPGRAIVANAGVLLTRIMGLK
ETPARKFAIIDGAMNDLIRPALYGAWQEIVAVKERQDSPEATYDIVGPVCETGDFLGKER
ALRIQQGDLLAVKSAGAYGFVMSSNYNTRNRAAEVIVDKEQFHIVRARESYDYQLQLESL
VP
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagccttccattaccaaaaccacgaacttcacgccgagcaagtgaacctcaca
cagctggccgaacaggtcggcacaccagcctacgtttattcgcgctcggcgattgagcag
caatggcttgcttttgatcgcgcttttggcgcgcatccccacctcgtgtgctttgcagta
aaagccaactccaatatcgcggtactgaacctcctcgcacgtttaggagccggctttgat
atcgtctcggaaggcgagctggagcgcgtactgcgggcgggcggcgaccccaaaaaagtg
gttttctcaggcgttggcaagcagccagcagagatggcgcgggcacttaccgttggcgtg
cgctgctttaacgtcgaatcggagagcgaactacatacgctcaaccaagttgcagcgacg
ctgggcgtaaaggcacctgtctcactccgagtcaacccagatgtagacgcacaaactcac
ccctacatttcgacgggcctgaaagaaaacaaattcggcattgatattgatcgcgccctg
caggtctatcgtgacgccagcgagctcccccacatcaacatcgtaggggttgactgccat
attggctcccaattgacccagctcgccccgttcctcgatgctctggatcgggtgctggtg
ctcgtagatgcgctgaaagcggaaggcattgcgcttcgtcatcttgaccttggcggcggc
ttgggcgtctgctaccgcaacgagcaaccacccagccctagcgactatgtacaagcgctg
cttacgcgccttggccagcaccccgaatttggcaagcagggcatagagatcattcttgaa
ccgggccgcgccatcgtcgcaaacgccggcgttcttctgacccgcatcatgggcctcaaa
gaaacccctgcgcgcaagttcgccatcatcgacggcgccatgaacgatctgattcggccc
gcactctatggtgcctggcaagaaattgtcgctgtcaaggaacgccaagactcgcccgaa
gccacctatgatatcgtcggccccgtctgcgaaaccggcgactttttaggcaaagagcgc
gcactccgcatccagcaaggggacctccttgcggtaaaatcggcaggcgcctacggcttt
gtgatgagttccaactacaatactcgcaaccgtgccgctgaagtgatcgtggataaagag
caattccacattgtgcgtgcccgcgaaagctacgactaccaacttcagctggaatccctt
gttccgtga
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