Gamma proteobacterium HdN1: HDN1F_01020
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Entry
HDN1F_01020 CDS
T01300
Symbol
nirE
Name
(GenBank) Putative uroporphyrin-III C-methyltransferase, initiates heme D1 synthesis
KO
K02496
uroporphyrin-III C-methyltransferase [EC:
2.1.1.107
]
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb00860
Porphyrin metabolism
gpb01100
Metabolic pathways
gpb01110
Biosynthesis of secondary metabolites
gpb01120
Microbial metabolism in diverse environments
gpb01240
Biosynthesis of cofactors
Module
gpb_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
HDN1F_01020 (nirE)
Enzymes [BR:
gpb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
HDN1F_01020 (nirE)
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Gene cluster
GFIT
Motif
Pfam:
HemX
DUF3450
DUF1664
CCDC22_CC
COG3_N
GAS
COG6_N
DUF4164
Osmo_CC
DegS
Acyl-CoA_dh_C
MIF4G_like_2
bZIP_1
DUF6244
DUF2968
Motif
Other DBs
NCBI-ProteinID:
CBL43685
UniProt:
E1VFU3
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Position
142446..143705
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AA seq
419 aa
AA seq
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MKAAPAAKPLPTPKPAPAVKPAPAPKPARSGGGGFTTTLAALSFLLAGGAIGGVGFLWWQ
QQQENPVVHNAIDALEAGVADVNNGLTSARQQFTQATASQKQLQEQVAKLGGERDMLQQH
LDNIEQRIVRVLEGSSRVDWMLSEAAQLVNVAERRLSLLGDVNGGLALLESAEKIVAAMD
EPMARPFRQALLNDIQALRGAQGEVIDTEGLLLRINSTKRLVEALEPPRPNFKIDRVETP
ESVAPGTSGIELAWHKIGTFMGSLVDFQRHKQPIVGIAVDPQTRFVMQQGLLLLLDQAQL
SVLRGDSSTYGLALKEVADRVERYTQSDSKTGKHLLAELKLLAEQPVKQRVPEISESLLA
MHAFRDAWNQQRPAREAAARRVEAAAPSDAQQPNAQQPEASTGNQTGTSALDAAQRRLP
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
ctgaaagcggctccggcagcaaaacccctaccgactccgaagcccgcgccggccgtaaag
ccagcgccagcgcccaaacctgcacgcagcggtggtggcggttttaccacaaccctcgca
gctctatcctttctgcttgcaggtggcgcgattggtggcgtcgggtttctttggtggcag
caacagcaagaaaaccccgtggttcataacgccattgatgcactggaggccggcgttgcc
gacgtgaacaacggcttgacgagcgcacgccagcagttcacgcaggccaccgcctcgcag
aaacagttgcaggaacaggttgccaaactcggtggcgaacgcgacatgctgcaacagcac
ctcgacaatattgagcagcgcattgttcgcgtgttggaaggcagttcacgcgtggactgg
atgctttccgaagctgcgcagctcgtgaatgtagcagaacgccgtctaagccttttgggt
gacgtaaacggcggccttgcgctgctcgaatccgctgagaaaatcgttgccgcaatggat
gagcccatggcacgccccttccgccaggcgttactgaatgacattcaggcgctgcgcggt
gctcaaggagaagtcatcgacaccgaagggctgcttctgcgcatcaacagcacaaagcgc
ttggtggaagccctagagccgccccgcccgaatttcaagattgatcgtgtcgagacgccc
gagagtgtcgcgcctggaacctctggcatcgaattggcttggcataagatcggaaccttt
atgggcagtcttgtggactttcagcgccataagcagcccattgtcggtatcgcggtggat
ccgcaaacccgctttgtgatgcagcaagggcttctgttacttttggatcaagcccagctt
tcggtgctgcgcggcgatagctccacctacggtctggcgctcaaagaagttgccgatcgg
gtagagcgttacactcaaagcgatagcaaaaccggcaaacatctactcgccgaactgaag
ctgctcgccgagcaaccagtaaagcaacgagtgcctgaaatcagcgaatccctgctcgcc
atgcatgccttccgcgatgcgtggaaccagcagcgccccgcccgcgaagccgccgcacgc
cgcgtagaggcagcagccccaagcgatgcgcaacagcctaatgcgcaacagcctgaagcc
agcaccggcaatcaaaccggcacgagcgcgttggatgctgcgcaaaggaggctgccgtga
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