Gamma proteobacterium HdN1: HDN1F_01420
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Entry
HDN1F_01420 CDS
T01300
Name
(GenBank) Hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
gpb
Gamma proteobacterium HdN1
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpb03400
]
HDN1F_01420
DNA repair and recombination proteins [BR:
gpb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HDN1F_01420
Archaeal homologous recombinant proteins
HDN1F_01420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF349
HEAT_2
Stealth_CR3
WHD_MCM3
Motif
Other DBs
NCBI-ProteinID:
CBL43725
LinkDB
All DBs
Position
191115..194012
Genome browser
AA seq
965 aa
AA seq
DB search
MFKNLFKPKWQHTKPEVRLEAVRQLSDESSDQAQILEQVAASDEVPAIRLAAARRMNNVD
RVVRLLQSEKDSDTRIKIQGHLMSLLGPDSAPSAVMKQWLADLSSDAVLQLLERTKSQDL
GERMLAAIRDEQTLAVLAVQLPLAALRKAAAQRVDAPQLLEEILKGSRSKDKNVYRIVRE
KLDAIQVAQQAGADLDRAISELCSALEAHSRTTQDPYYAAKFEHLQKRWLPLAEQASADQ
RARYLAGVTACRAIMEDVAAEALAETTRLEQEASQAQHNDALAGELCNTLETALTGATAQ
PEAASHKVLAELLSINRKRWSDEFSEAQPSARLKKRFQEVCVRAENLAGALQSLNTQETA
IRDAATALLERTEDHIHTLLEQKKQLDKAMQGLRWPTGLALPEVLQLQQRAAAHFDVVRD
RLLMQEQQQQDALEKEITKLVKEIEKGNLKAAQQHLRDCNRRVRELPIKKAQALQHKVRE
LTARVNELRDWQGFATLPKKEALCEQMEALAGVEMDPQALAGRIKRLQDEWRTLGGGDGE
QGQALWERFSKAADFAYEPCREYFEKLAAVRQVNLEARQLLCQQLDDYLHKTDWAVIDWR
AAHEIFELAKEQWRTYSPVERKAGKDVQDRFNGLLQEMEQRFHAEFEKNTQARRALIGQA
ESLLHAENLQDAIEKAKHLQQEWKQIGMVGPRQDGKLWKQFRAACDGLFARRDQAREDAQ
AQRDRSVSEAGAICAALESLANAADARKDAQETAQTREQTDALEAQFEALGPLPREQAGE
LRRRFQNALEAIRRGLARQQQQGRRDRFSSLWVLAAWLDEQEGRRLTDAEFSVPSTLPEP
GALPDMDALPNGAVNLAQQRLKALQQGDLQAIEPVLVKNAETLRQLCLRLELGAGLETPS
EDRAYRMQFQINQFNKGERAPATHQEADEQLERLQLEWLAVGPVAVADRERYLRRFQDGL
SQAYR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaaacctgttcaagcctaagtggcagcacactaagcctgaagttcgcctggaa
gctgtgcgccagttgagcgacgagagttcagatcaggcgcagattctggagcaggttgcg
gcgagcgatgaagttcccgcgattcgattggcagcggctcggcgcatgaataacgtggat
cgtgtggtgcgtctgcttcaaagcgagaaagacagcgatacccggatcaagattcagggg
catttgatgagtctgctgggcccggattcggcaccttcagcggtgatgaagcaatggctg
gcagacctttcaagcgatgcggttttgcaactgcttgagcgtacgaaaagccaagacttg
ggcgagcgcatgttggcggcaattcgtgatgaacaaacgcttgcggtgcttgcggttcag
ctaccgttggcggctctgcggaaagcggccgcgcagcgggttgatgctccccagttgcta
gaggaaattctaaaagggtcgcgcagcaaagataaaaatgtataccgcattgttcgggaa
aagcttgatgcgatacaagtagcgcagcaggccggtgctgatcttgatcgggcgatctcg
gaattgtgcagtgcgcttgaagctcatagccgcaccacgcaggatccgtattatgctgca
aagttcgaacacctgcagaagcgttggctgccgcttgccgagcaagcgagcgccgaccag
cgcgcccgttatctggcgggcgttacagcgtgtcgagccataatggaagacgttgccgca
gaagcgcttgcagaaaccactcgccttgaacaagaagccagccaagcgcaacataacgac
gcgcttgcgggtgaactctgtaacactcttgaaactgcgcttaccggcgctactgcgcag
cctgaggctgcaagccacaaagtgcttgcggagctgctttcaatcaatcgaaaacgctgg
agtgatgaattttctgaggcacagccctccgcgcgcctcaaaaagcgttttcaggaagtt
tgtgtgcgtgcagaaaatcttgcaggtgcgctccagagcttgaatacccaagaaactgca
attcgcgacgctgcaacagcgctgcttgagcgaacggaagatcatatccacacgctgcta
gaacagaaaaagcagctagataaagccatgcagggcttacgttggcctacagggcttgcg
ttaccagaagttttacagctgcagcagcgtgcggcagctcatttcgatgtggtgcgtgat
cgcctgttaatgcaagaacagcagcagcaagatgctcttgaaaaagaaatcacgaagctg
gtcaaagaaatcgaaaaaggcaacctgaaagcggcgcaacaacacctgcgtgattgcaat
aggcgcgtgcgcgaattgccgattaaaaaagcccaagccttacagcacaaggtgcgtgag
ctgaccgcgcgtgttaatgagctgcgtgactggcagggctttgcgacgcttcctaaaaaa
gaagctttgtgcgaacagatggaggctctggcgggtgtagaaatggatccacaggctttg
gcgggccgcatcaaacgcctgcaggacgagtggcgcacgctcggcggtggagatggtgag
cagggtcaagcgttgtgggagcgctttagcaaagcagcggattttgcgtacgagccttgc
cgcgaatattttgaaaaattggctgcagttcgccaagtcaatctggaagcacgccaattg
ttgtgccagcagttggacgattatctccataaaacagactgggcggtaattgactggcgc
gccgcgcatgaaatttttgaacttgcaaaggagcaatggcgcacttactccccagtagaa
cgaaaagcaggcaaggatgtgcaggatcgtttcaatggtcttttgcaggaaatggagcag
cgcttccatgctgaattcgaaaagaacacgcaagcccgccgcgcgctgatcggccaggcg
gaatcactgctacacgccgagaacctgcaggatgccatcgaaaaggccaaacacctgcag
caggagtggaaacagatagggatggtggggccgcgccaagatggtaagctctggaagcag
tttcgcgcagcttgcgacggattgtttgcgcgccgtgatcaggctcgcgaagatgcgcag
gcgcaacgtgatcgcagcgtgagcgaggcgggggcaatctgtgccgcgcttgagagcttg
gcaaacgctgccgacgcacgcaaggatgcgcaggaaactgcgcaaacacgcgagcagacc
gacgctctagaggctcagtttgaggctttaggcccattgccgcgcgaacaggctggcgaa
cttcgccgccgctttcagaatgcgttagaggcaatccggcgcggccttgcgcggcaacaa
cagcaaggccgacgcgatcgcttttccagcttgtgggtgctggctgcgtggctggatgag
caggaagggcgcaggctcaccgatgccgaatttagtgtgcccagcacactgccagaaccg
ggcgcattgccagacatggatgcattgccgaacggtgccgtgaatcttgcccagcagcgc
ctcaaagcccttcagcaaggcgacctgcaggcaatcgagccggtgcttgtgaagaacgca
gaaaccctacgtcagctatgcttacgtctagagttaggtgcaggcttggaaacgccgtca
gaagatcgcgcctatcggatgcagttccagatcaatcaattcaacaagggcgaacgagca
ccggcaacgcaccaagaggcagacgagcagctagagcgcttgcaactggagtggctagcc
gtgggccctgtggcagtcgctgaccgtgagcgttatctgcgcaggtttcaagatgggctt
tcacaagcatatcgctaa
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