Gamma proteobacterium HdN1: HDN1F_02860
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Entry
HDN1F_02860 CDS
T01300
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase omega chain
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HDN1F_02860 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gpb03021
]
HDN1F_02860 (rpoZ)
03400 DNA repair and recombination proteins [BR:
gpb03400
]
HDN1F_02860 (rpoZ)
Enzymes [BR:
gpb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HDN1F_02860 (rpoZ)
Transcription machinery [BR:
gpb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HDN1F_02860 (rpoZ)
DNA repair and recombination proteins [BR:
gpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HDN1F_02860 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
CBL43869
UniProt:
E1VGC7
LinkDB
All DBs
Position
complement(373619..373861)
Genome browser
AA seq
80 aa
AA seq
DB search
MARITVEDCLQQIPNRFELVLVSAKRARQLATGGKEPFVPWENDKPTVVALREIAKQYVG
MSILDNAPSEADIQQELENV
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcattacggttgaagattgcctccaacagattccgaatcgctttgaactggta
ttggtgtccgccaagcgcgctcgccagctcgcaacaggtggcaaggagccattcgtacct
tgggaaaacgacaaaccgaccgttgtcgctctgcgcgaaatcgccaaacaatacgttggc
atgtccattctggacaacgcacctagcgaagccgacatccagcaggaacttgaaaacgtt
taa
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integrated database retrieval system
