Gamma proteobacterium HdN1: HDN1F_03400
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Entry
HDN1F_03400 CDS
T01300
Symbol
rluD
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
gpb
Gamma proteobacterium HdN1
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gpb03009
]
HDN1F_03400 (rluD)
Enzymes [BR:
gpb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
HDN1F_03400 (rluD)
Ribosome biogenesis [BR:
gpb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HDN1F_03400 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
KDM5_C-hel
Motif
Other DBs
NCBI-ProteinID:
CBL43923
UniProt:
E1VGI1
LinkDB
All DBs
Position
431575..432531
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AA seq
318 aa
AA seq
DB search
MTQIQHQATIPDDLSGKRLDQAAAQLFPDYSRARLQEWIKMGALTINQQVGVAKEKVIGG
EQLFLSVELQADERVKPQNISLDIVHEDDSLLIINKPAGLVVHPGSGHSEGTLVNALVNH
APKLAELPRAGLVHRIDKDTTGLLVVAKTLEAHTDLVAQLQAKLVKREYEAIAQGVMTGG
GKVDAPIGRHPTQRTKQAVVSSGREAVTHYRVVARYRAHTHIRLALETGRTHQIRVHMAH
IHYPLLGDPDYGGRLRLPKAASPEFIEALQGFRRQALHAQRLALHHPESGDWVAWEVPLP
EDFVQLLAAIKADHALDG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaatccagcatcaggcaaccattcctgacgatctttccggcaagcggctggat
caggccgccgcccagctttttcccgattattcgcgcgctcgcttacaagagtggatcaaa
atgggggcgttaaccatcaatcagcaggtgggcgttgccaaagagaaggtcatcggggga
gagcagctattcttgagcgtcgagctacaggccgatgaacgcgtaaagccccagaacatc
tccctcgacattgttcatgaagatgacagtctgctgatcatcaataaacccgctgggctg
gtcgttcatcctggctcggggcatagtgaaggcacgctcgtcaatgcgctcgttaatcat
gcgccgaaacttgccgaactaccgcgcgcagggctcgtacaccgcattgataaagacaca
actgggctattggtcgtcgcgaaaacccttgaagcgcatactgatcttgtcgcccagctt
caagccaaactcgtcaaacgcgagtacgaagccatcgctcaaggcgtcatgaccggtggt
ggaaaagtagacgctcccattgggcgccacccaacccagcgcaccaagcaagccgtcgta
tccagtggccgcgaagcggttactcactatcgtgttgttgcccgttatcgcgctcacacc
cacattcgtcttgccctagaaacagggcgcacgcaccaaattcgcgttcacatggcgcat
atacactatcccttactgggcgaccctgactacggcggccgcctacgtctacccaaggca
gcaagccccgaattcatcgaagcgctgcaggggtttcgacggcaagcattgcatgcacag
cgcctcgcgctccatcaccccgaaagcggcgactgggttgcgtgggaagtgcctttgcca
gaggattttgtgcaactgctggcagcgattaaagcagaccatgcgctggatggataa
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integrated database retrieval system