Gamma proteobacterium HdN1: HDN1F_05820
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Entry
HDN1F_05820 CDS
T01300
Name
(GenBank) predicted helicase
Organism
gpb
Gamma proteobacterium HdN1
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
CBL44165
UniProt:
E1VH73
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All DBs
Position
complement(726318..729290)
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AA seq
990 aa
AA seq
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MPLRPSTRIRYTLGTHDGWPLRLWLSLKGAAGDAPLQPFAPSWAWLQAQRSALSAADWRI
LRLLRELDAGWETRAQLDLKPSHLVELLPALAQSHRCFWQGASPHTPFCLGASRPAQLHW
KPLENGQQRLEISIPGVECFPGPEAFYIDIHLWEIGQADCGATPEALRWVERGVVVNPGE
FELFLQRHGEALQRARLPLPTDFPTRLWHNPPTPCLLFYSIRTHLIARQSYRRPALIDAI
RASFTYLGPMGRVEFLAEHHAAYQYRYFAGVLHKIERDLSEEQRWLAMLEQSLLSLSPLE
AIYQGAQFTDGVLPGDLCVRSAREWQQLLLTQAPIWREQGWHISIANAFRHHFVASERWR
VHLEKDHQGRFALGLSAEIEGEKQVLLPTLLQTLAATPELADIDFRDDAELGAGSRGEDH
ILGLNDGRRVVIPADLLALLLQHLPELFDQPRLDKQGCLTLPASQAGRLALLAESFQRYW
HDPQQLGATLPQTLEREAFSANAWEGLNAHLRDYQLQGVAWLRSLANRQLGGILADDMGL
GKTLQMLAFLLHEKNVGHLQQPALVVAPTSVLQNWAREAQKFTPTLRCFVVHGGDRMAQI
SSHAQTDLFITSYALSLRDFTFWQSIPLSYLVLDEAHMIKNSSTKVAKALRQLESDHKFC
MTGTPLENHLGELWSLFEFMMPGSLGSEARFKRVYRIPIEKHHNETRAVGLLQRIQPHIL
RRKKSEVAKELPSKTEVLIPITMTEPQREFYDALHALTQREITDLLLADGHETTRISILD
ALLRLRQLCCDPRLLPLEDAKSLPSAKLDHLLVMLEELVEEGRRILVFSQFTSMLALIRE
ALQQRKIPHLLLTGATQNRQALVERFQAENEPIFLISLKAGGVGLNLTAADTVIHFDPWW
NPAAEEQATDRAYRIGQDKPVFVYKLICEGTIEEKIVLLQERKRALQDAITGAAELLPAA
PLSDEDLVFLLSQTVTQTGAGTTTQPSEAR
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgcggccttccaccagaattcgctacacccttggcacccacgacggctggcct
cttcgcctgtggctgagcctcaagggcgccgcgggggatgcacctttgcagccgttcgcg
cctagttgggcgtggcttcaggcacagcgtagcgcgctctccgctgctgactggcggatt
ctgcgcctgctgcgcgagcttgatgccggctgggaaacgcgcgctcaactggatctaaag
cccagccatctggttgagttgctgccggcgctcgcgcagagccatcgctgcttctggcaa
ggagcctcgccgcatacgcccttttgtctcggcgcatcaagacccgcacaattgcactgg
aagccattggagaatggccagcagcgtttggaaatcagcattcctggggtggaatgcttt
cccgggccggaagctttttatattgacattcacctttgggagatcggccaagcagactgt
ggcgcaaccccagaggcattgcgctgggtggaacgtggcgtggtggtcaatccaggggaa
tttgaactttttttgcagcgccacggtgaggcactgcagcgcgcccgattgcctttgccg
accgattttccgacccggctatggcacaacccgccgaccccctgtctgctgttttacagt
attcgcactcatctgattgcccgccaaagctatcgcaggccagcgctcattgacgcaata
cgcgccagctttacctatcttgggccgatggggcgcgtggaatttctggcagagcatcac
gcagcttatcaatatcgttattttgccggcgttcttcataaaatcgagcgtgacctgagc
gaagaacagcgctggcttgccatgctcgaacagtctttgctttcactctcgcctttggaa
gccatttatcaaggcgcgcaatttaccgatggggttttgccgggagatttgtgtgtgcgg
agtgcgcgagaatggcaacaattgctgctgactcaggcgccgatatggcgcgagcagggc
tggcatatcagcatcgcaaatgcgtttcggcatcattttgtggcgtctgagcgctggcgg
gttcatcttgagaaggatcaccaagggcgctttgcgctcggcttaagtgccgagatcgag
ggcgaaaaacaggtgttactgccaacacttcttcaaacgcttgccgcaacgccagagctt
gcggacatagatttccgggacgatgcggagctcggcgcgggaagccgtggcgaggatcac
attctggggctgaatgatggaagacgcgtcgtaattcctgcggatttgcttgccctgcta
ttgcagcacctaccggaattattcgatcagccgcgcctcgacaaacaagggtgcttgact
cttcctgccagtcaggccggacgtttagcgttacttgccgagtctttccagcgttattgg
cacgatccgcagcagcttggcgctacactcccacaaacactggagcgtgaggcattttcg
gccaacgcttgggaaggcttgaatgcacatttgcgggattatcagcttcaaggggtggcg
tggctacgctcgcttgcgaatcgccaactgggagggattcttgcggatgacatggggctt
ggaaagacgctgcaaatgctggcgtttttgcttcatgagaaaaacgtgggccacctgcag
cagccagcgctagtggtagctcccaccagcgtgctacaaaactgggcacgcgaagcgcag
aaattcacgccaaccctgcgctgcttcgtggtgcacggtggcgacagaatggcgcagatt
tcttcacacgcgcagacggatttgtttattacttcctatgcgcttagcttgcgcgacttt
actttttggcagtcgatcccgctcagctatctggtactggatgaagcgcatatgatcaag
aattccagcaccaaagtggcgaaggcgcttcgccaactggagagcgatcacaaattctgc
atgacaggaactccgctggagaaccaccttggcgaactttggtcgctgtttgaattcatg
atgccaggcagtcttggctcagaggcgcgttttaagcgggtttatcgaattccgattgag
aaacatcacaacgaaacgcgggcggtgggtttgttgcagcgtattcagccgcacattcta
cgccggaaaaaatccgaggttgccaaggaattaccgtctaaaactgaggtgctgatcccc
atcaccatgactgaacctcagcgtgaattttatgacgccctgcatgcgctcacgcaacgc
gaaatcaccgatctgttgctcgcagatggccatgaaacgacgcgcatttccattctggac
gctctgctgcgcctgcggcaattgtgctgcgacccgcgcctcttaccgcttgaagacgca
aaatcacttccctcggcaaagctggatcatctgctagtaatgctcgaagagttggtcgag
gaaggccggcggattttggttttctcgcagtttacttcgatgctggcgctaatccgcgaa
gctttgcagcagagaaaaatcccacacttattgcttaccggcgcaactcaaaaccgccaa
gcgctagtagaacgcttccaagcagaaaatgaaccgatctttttaattagcctgaaggcg
ggcggggtcggcctgaatctaaccgctgccgatacggtgatacattttgatccgtggtgg
aacccagccgcagaggaacaggccaccgatcgcgcgtaccgaatcggccaagacaaaccg
gtctttgtctataagctgatttgcgaggggacaatagaagaaaaaatcgtgctgctgcag
gaacgcaaacgcgccctgcaagatgccatcaccggggcggcagagctattacctgcggcc
ccgttgagtgatgaggatctggtgtttttgctttctcaaactgtgactcaaacgggtgca
ggaactactacgcaaccgtctgaggctcgctaa
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