Gamma proteobacterium HdN1: HDN1F_06700
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Entry
HDN1F_06700 CDS
T01300
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine-D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb00470
D-Amino acid metabolism
gpb00550
Peptidoglycan biosynthesis
gpb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HDN1F_06700 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HDN1F_06700 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gpb01011
]
HDN1F_06700 (murD)
Enzymes [BR:
gpb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
HDN1F_06700 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
gpb01011
]
Precursor biosynthesis
Amino acid ligase
HDN1F_06700 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
UPRTase
TrkA_N
Peripla_BP_4
Pyr_redox
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
CBL44253
UniProt:
E1VHG1
LinkDB
All DBs
Position
816792..818120
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AA seq
442 aa
AA seq
DB search
MRIVVGLGKTGLSCIRSLHAAGERVCVMDTRDEPPGLDQVLDQFPDVRLSLGGLDEDLLC
GAEEIIVSPGISTATAPLQKAVARGIPVVGDIELFCREVKTPILAITGSNAKSTVTTLMG
EMVKGSGRSVVVGGNIGVPVLDVLQEAQSAEFCVLELSSFQLETTYSLRAHVATILNISP
DHLDRYPSMKEYTAAKHRIYRNARHTVANADDSATLPHPMFTEHDWRFTTRSPSARTFGL
QLNESASWLGVANEALMPVSELRIKGRHNQANALAALAIGSAAGLEMQHMLNTLREFRGL
AHRCEWIRERDGVQWYNDSKGTNVGATVAAIDGIGSEISGKIVLVAGGDGKGADFVELQK
PVEKYVKAAVLLGQDAAKMERVLAPHCTIKRVSSLQDAVGAAAELALAGDAVLLSPACAS
LDMFKNYEDRGNQFADLARALS
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcgtggttggccttggaaaaacagggttgtcttgtattcgctcccttcatgcc
gcgggggagcgagtgtgcgtcatggacactcgtgatgagccgcctggactggatcaggta
ttggatcagtttccggatgtgcgcctgtcgctcggtgggctggacgaagatttgctttgc
ggtgcagaagaaattattgtcagcccagggatctctacagcgaccgcgcccctgcaaaaa
gcagtagcgcgcggcatccccgtggtcggtgatattgaattgttttgccgggaagtaaaa
acaccgatcttggcgattaccggctcaaatgcgaaaagcaccgtgactacgctaatgggg
gaaatggtcaaaggttctgggcgctccgtcgtagtcggcggaaatatcggcgtgccggtt
ctggatgttttgcaagaagctcaatctgcggagttctgtgttttggaactctccagcttc
cagttggaaactacttattccctgcgtgcacacgttgccaccatcctgaatatctcaccc
gatcaccttgatcgttatccttctatgaaggaatacaccgcagcgaagcatcggatttat
cgcaacgcgcgccataccgttgcaaatgctgacgattctgcaaccttgcctcacccgatg
tttaccgaacatgattggcgttttaccacccgttctccatccgctcgcacgtttggtttg
cagttgaatgaaagcgcatcttggctgggtgttgccaatgaagcgttgatgccggttagc
gagctaagaatcaaaggccgccataatcaggcaaacgcgctagcagcactcgcaattggt
agcgcggcaggcttagaaatgcagcacatgctgaatacactacgagaatttcgcgggctc
gctcaccgttgcgagtggattcgtgagcgggatggcgtgcagtggtataacgattccaaa
ggcacaaacgtaggcgcgaccgtcgcagctattgacggaattggaagtgaaatttctgga
aaaattgtgctggttgcgggcggcgatggaaagggcgcggattttgttgaactgcaaaaa
ccggttgagaagtacgtgaaagccgcagttttattaggccaagatgcagcgaaaatggag
agggtgcttgcgcctcattgcacgatcaagcgagtttctagcttgcaagatgcagtcggc
gctgcggcagagcttgcccttgcaggggatgctgtgttgctctcgcccgcatgcgcaagt
ttggatatgtttaagaactacgaagatcgggggaatcagtttgcggatttggcgagggca
ctttcatga
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