Gamma proteobacterium HdN1: HDN1F_06890
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Entry
HDN1F_06890 CDS
T01300
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb00521
Streptomycin biosynthesis
gpb00523
Polyketide sugar unit biosynthesis
gpb00541
Biosynthesis of various nucleotide sugars
gpb01100
Metabolic pathways
gpb01110
Biosynthesis of secondary metabolites
gpb01250
Biosynthesis of nucleotide sugars
Module
gpb_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HDN1F_06890 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HDN1F_06890 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HDN1F_06890 (rmlC)
Enzymes [BR:
gpb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
HDN1F_06890 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
YlxR
Motif
Other DBs
NCBI-ProteinID:
CBL44272
UniProt:
E1VHI0
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All DBs
Position
840203..840748
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AA seq
181 aa
AA seq
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MNVVESGLPEVLILEPRVFGDSRGFFYESYNAARFRELTGLTVDFVQDNHSRSGRGVLRG
LHYQVQQPQGKLVRVVRGSVWDVAVDVRRSSPSFGRWVGVELSEENQKEMWIPPGFAHGF
VVLSESADFLYKTTDYYAPQHERCIVWDDRDLGVNWMYEGDPILSEKDKAGASLKEAELP
D
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttgtggaaagtgggttgcctgaagtattgatcttggagccgcgcgtttttggc
gattcgcgggggttcttttatgaaagttataacgctgcccgctttcgtgagctgactggt
ttgacggtcgattttgtccaagataaccacagccgctcggggcgtggggtgttgcgtggc
cttcactatcaggtgcagcagccgcaggggaaattggtgcgtgtcgtgcgtggcagcgta
tgggatgttgccgtagatgtgcgccgcagttcgccgagtttcgggcgctgggtgggggtc
gaattatccgaggaaaaccagaaagaaatgtggattccgcccggctttgcgcacggtttt
gtcgttttgagtgagagtgcggattttctgtataaaacgacggattattacgcgccgcag
catgagcgttgcatcgtttgggatgaccgcgatcttggtgtgaactggatgtacgagggc
gatccgattctttcagaaaaagataaagcaggggcttctttgaaagaggctgaattgcca
gattga
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