KEGG   Gamma proteobacterium HdN1: HDN1F_08030
Entry
HDN1F_08030       CDS       T01300                                 
Symbol
dapF2
Name
(GenBank) Diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
gpb  Gamma proteobacterium HdN1
Pathway
gpb00300  Lysine biosynthesis
gpb00470  D-Amino acid metabolism
gpb01100  Metabolic pathways
gpb01110  Biosynthesis of secondary metabolites
gpb01120  Microbial metabolism in diverse environments
gpb01230  Biosynthesis of amino acids
Module
gpb_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:gpb00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    HDN1F_08030 (dapF2)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    HDN1F_08030 (dapF2)
Enzymes [BR:gpb01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     HDN1F_08030 (dapF2)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: CBL44386
LinkDB
Position
complement(988386..989225)
AA seq 279 aa
MQPIPTPLAFTKMHGLGNDFMVLDATRAPIHLDSEQIRRLADRHFGVGFDQLLVVESATN
PEVDFNYRIFNADGGEVEQCGNGARCFARFVHEKGLTQKNPVRVSTKAGIIQLNLQGDFV
QVDMGVPKTSPKEIPFSAATDEIFHFLKVGDQTLTISVVNMGNPHAVLQVSNVETAPVAQ
IGPMIESHPSFPARVNVGFMEVVSRNHIKLRVFERGAGETLACGTGACAAAVAGIRAGLL
DSPVKVELAGGELQIQWAGIATSVIMEGPATKVYEGFWG
NT seq 840 nt   +upstreamnt  +downstreamnt
atgcagcctattcctacccctctcgccttcaccaaaatgcacggccttggcaacgatttt
atggtgctagacgctacgcgtgcgcccattcacctcgatagcgaacaaattcgccgcttg
gctgaccgtcattttggagtgggttttgatcagctgctcgtcgtagaatccgccaccaac
ccagaagtcgattttaattaccgaatttttaatgccgacggcggtgaagtagagcaatgc
ggaaacggcgcgcgctgcttcgcccgatttgtgcacgagaagggactcacgcaaaaaaac
cccgttcgcgtatccaccaaagccggcattatccagttaaatctgcaaggcgatttcgtg
caggtagacatgggcgtaccgaaaacctcccccaaggaaattcccttttccgccgctacg
gacgagatcttccactttcttaaagtgggtgatcagacgctgacaatttcagtcgtcaac
atggggaacccccacgcagttctacaagtttccaacgtcgaaactgcacccgtcgcacag
atcggcccaatgattgaatcgcaccccagctttcccgcccgcgtaaacgtaggctttatg
gaagtcgtatcacgaaaccacataaaactgcgtgtttttgaacgcggcgccggtgaaacc
ctcgcctgcggaaccggcgcctgcgcggccgccgttgcgggaattcgcgccgggctttta
gatagccctgtaaaagttgaactcgccggcggtgaattacagattcagtgggcaggaatc
gccacctctgtcatcatggaaggcccagccactaaggtttacgaaggattctggggctag

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