Gamma proteobacterium HdN1: HDN1F_08030
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Entry
HDN1F_08030 CDS
T01300
Symbol
dapF2
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb00300
Lysine biosynthesis
gpb00470
D-Amino acid metabolism
gpb01100
Metabolic pathways
gpb01110
Biosynthesis of secondary metabolites
gpb01120
Microbial metabolism in diverse environments
gpb01230
Biosynthesis of amino acids
Module
gpb_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HDN1F_08030 (dapF2)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HDN1F_08030 (dapF2)
Enzymes [BR:
gpb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HDN1F_08030 (dapF2)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
CBL44386
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Position
complement(988386..989225)
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AA seq
279 aa
AA seq
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MQPIPTPLAFTKMHGLGNDFMVLDATRAPIHLDSEQIRRLADRHFGVGFDQLLVVESATN
PEVDFNYRIFNADGGEVEQCGNGARCFARFVHEKGLTQKNPVRVSTKAGIIQLNLQGDFV
QVDMGVPKTSPKEIPFSAATDEIFHFLKVGDQTLTISVVNMGNPHAVLQVSNVETAPVAQ
IGPMIESHPSFPARVNVGFMEVVSRNHIKLRVFERGAGETLACGTGACAAAVAGIRAGLL
DSPVKVELAGGELQIQWAGIATSVIMEGPATKVYEGFWG
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctattcctacccctctcgccttcaccaaaatgcacggccttggcaacgatttt
atggtgctagacgctacgcgtgcgcccattcacctcgatagcgaacaaattcgccgcttg
gctgaccgtcattttggagtgggttttgatcagctgctcgtcgtagaatccgccaccaac
ccagaagtcgattttaattaccgaatttttaatgccgacggcggtgaagtagagcaatgc
ggaaacggcgcgcgctgcttcgcccgatttgtgcacgagaagggactcacgcaaaaaaac
cccgttcgcgtatccaccaaagccggcattatccagttaaatctgcaaggcgatttcgtg
caggtagacatgggcgtaccgaaaacctcccccaaggaaattcccttttccgccgctacg
gacgagatcttccactttcttaaagtgggtgatcagacgctgacaatttcagtcgtcaac
atggggaacccccacgcagttctacaagtttccaacgtcgaaactgcacccgtcgcacag
atcggcccaatgattgaatcgcaccccagctttcccgcccgcgtaaacgtaggctttatg
gaagtcgtatcacgaaaccacataaaactgcgtgtttttgaacgcggcgccggtgaaacc
ctcgcctgcggaaccggcgcctgcgcggccgccgttgcgggaattcgcgccgggctttta
gatagccctgtaaaagttgaactcgccggcggtgaattacagattcagtgggcaggaatc
gccacctctgtcatcatggaaggcccagccactaaggtttacgaaggattctggggctag
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