KEGG   Gamma proteobacterium HdN1: HDN1F_08420
Entry
HDN1F_08420       CDS       T01300                                 
Name
(GenBank) Type III restriction enzyme, res subunit
  KO
K01156  type III restriction enzyme [EC:3.1.21.5]
Organism
gpb  Gamma proteobacterium HdN1
Brite
KEGG Orthology (KO) [BR:gpb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:gpb02048]
    HDN1F_08420
Enzymes [BR:gpb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.5  type III site-specific deoxyribonuclease
     HDN1F_08420
Prokaryotic defense system [BR:gpb02048]
 Restriction and modification system (R-M system)
  Type III R-M system
   HDN1F_08420
SSDB
Motif
Pfam: ResIII SWI2_SNF2 Tn7_TnsA-like_N Helicase_C
Other DBs
NCBI-ProteinID: CBL44425
LinkDB
Position
1032871..1035522
AA seq 883 aa
MLEHDGRDVAAILSTLKAQFPTLEDFEREFPSLCFALATGVGKTRLMGAFIAYLHLAHGI
NNFFVLAPNLTIYNKLIADFTRNTPKYVFKGIAEFAQQPPLIITGDNYDQTGAAVDDQPL
GFAPDVRINIFNISKINSEVRGGKEPRIKRMREVLGDSYFNHLANLPDLVLLMDESHRYR
AQAGMRAINELKPLFGLEVTATPFVESSKGPIPFKNVVMDYPLARAMGDGFVKEPAVVTQ
RNFSASAHTPEDVEKIKLEDGVRLHETTKVELLTYARENGVKPVKPFMLVIARDTTHAAS
LLALVESEAFYEGRYKGKAIQVDSSQTGAKEEEMITRLLAVESVDEPTEIVIHVNMLKEG
WDVTNLYTIVPLRAANARTLIEQSIGRGLRLPYGKRTGVAAVDRLNIVAHDKFQEIINEA
NRGDSPIRLQQLILDAPSADDNKVSVQVVSRVATQLGLADTPTVDPASAAAIGEGASAPA
SAPAFTTETEKQAARVVMNVIAQYEAKRDRVPTSRALLKPEVQKDILAEVAERLKPLQSD
LLAGVDEGTPALDSSAMSLSEIVAKTTEIIVQQTIDIPRIAVVPKGKVTTGFHPFQLDVN
ALHLQPGEREIVIHNLHTNAQDTLAAEIGLREQRPEDYIVHALVDFDDIDYFTQADLLYA
LAGQMVEHLHSYLSEDEALSVLGRDRRLIAKEIHAQMMAHFFEDATEFEVQVSRGFTELK
ACNYTATAGQAPRHYRETVDEVSRIKAMLFGGFTRCLYPLQKFDSDTERRFAIILERDAS
KWFKPAKGQFQIFYKLGTEQPEYIPDFVAETDSTIFMVETKARGDINTQEVQAKAAAAVQ
WCKHASDYTESVGGKPWKYLLVPHDEVNESRRLTDFLRFEVKD
NT seq 2652 nt   +upstreamnt  +downstreamnt
atgctggagcacgatgggcgtgacgtagccgccatcctgtccacgctgaaggcgcaattc
cctacgctggaagacttcgagcgcgagtttccctcgctgtgcttcgcgctggccacgggt
gtgggcaaaacgcggctgatgggggcgttcattgcctacctgcatctggcgcacggaatc
aacaatttcttcgtactcgcgcccaacctgaccatctacaacaagctgattgctgatttc
acccgcaacacgcccaagtacgtgttcaagggcatcgccgagttcgcgcaacagccgccc
ttgatcatcaccggcgacaactacgatcagaccggtgcagcggtggacgatcaaccgctg
ggctttgcccccgatgtccgtatcaacatcttcaacatctccaagatcaattccgaagtg
cgcggtggcaaggagccgcgtatcaaacgtatgcgcgaggtgctgggtgacagctacttt
aaccatctggccaacctgcccgatctggtgctgttgatggacgaatcgcaccgctatcgg
gcgcaagccggaatgcgggccatcaacgaactcaaacctctgtttggcctggaggtgacg
gcgacgccttttgtggaatccagtaaggggccaataccgttcaagaatgtagtgatggac
tacccactcgcgcgcgcaatgggcgatggcttcgtcaaggagccagctgtggtgacccag
cgcaacttttcggcttcggcacacacgccggaagacgtggaaaagatcaaactggaagac
ggcgtgcgcttgcacgaaaccaccaaggtggaactgctcacctacgcccgcgaaaacggc
gttaaaccggttaagcccttcatgctggtgattgcacgcgataccacacacgcagcgagt
ttgctggcgctggtggaatcggaggccttctacgaggggcgttataaaggcaaggccatt
caggttgattccagccagacgggggcgaaggaagaggagatgatcacgcgcctcctcgcc
gtggagagcgtggacgagcccaccgagatcgtgattcacgtcaacatgctcaaagaaggc
tgggacgtaaccaacctctacaccatcgtgccattgcgcgcggccaacgcccgaaccctg
attgagcagagcatcggtcgcggcctgcgcctgccctatggcaagcgcaccggcgtagcc
gcagtggatcggctgaacatcgtcgcccacgacaagtttcaggaaatcatcaacgaggcc
aaccggggcgattcgcccattcgcctgcaacaactcatcctcgatgcaccatctgccgac
gataacaaagtgagcgtgcaggttgtctctcgcgtggcaacacagctagggttggcagat
accccaacggtcgatccggcctcggcagccgctattggagaaggtgcatcagcgcctgcg
tcagcgccggctttcaccactgagaccgaaaaacaggcggcacgcgtggtgatgaatgtt
atcgctcaatacgaggccaagcgcgaccgagtgccgaccagccgtgcgctgctgaaaccc
gaagtgcagaaggacattctggcggaggtggccgagcggttgaagccgctgcaaagcgac
ttgttggcgggcgtggatgagggtacgcctgcattggattcgtctgccatgtctttatca
gaaattgtggcgaagacgaccgaaatcatagtgcagcaaaccatcgacatcccacgtatt
gctgtggtgcccaagggtaaagtcaccaccggcttccacccgtttcagctggatgtaaac
gcgcttcacctccagcccggtgagcgcgaaatcgtgatccacaacctgcacaccaacgcg
caagacacgttggctgccgaaatcggcctgcgggagcaacgccctgaggattacatcgtc
cacgcgctagtggatttcgacgacatcgactatttcacccaagccgacctgctttacgcg
ttggccgggcaaatggtggaacacctgcacagctacctttcagaagacgaagcgctcagc
gtgttgggtcgcgatcgtcgcctgattgccaaagaaattcacgcgcagatgatggcgcac
tttttcgaagacgcaaccgagtttgaagtgcaggtcagtcgcggttttaccgagctgaaa
gcctgcaattacaccgccacagcaggccaagcgccacgccactaccgtgaaaccgtagat
gaagtatcgcgcattaaggcgatgctgttcggcggttttactaggtgcctgtaccccttg
caaaagtttgattcagataccgagcggcgctttgccatcattctggagcgtgatgccagc
aagtggttcaagccggccaaaggtcagtttcagatcttctacaaactgggcaccgagcag
ccggaatacatccccgacttcgtggcagaaaccgattcgacgatcttcatggtggaaacc
aaggcgcgtggcgatatcaatacgcaagaggttcaggccaaagccgccgcggccgtgcag
tggtgcaaacatgcttccgattacacggaaagcgtcggcggcaagccttggaagtatctg
ctagtgcctcatgatgaagtgaatgaatcacggcggcttaccgattttctgcggttcgaa
gtgaaggattga

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