Gamma proteobacterium HdN1: HDN1F_09270
Help
Entry
HDN1F_09270 CDS
T01300
Name
(GenBank) PAS/PAC domain
KO
K03406
methyl-accepting chemotaxis protein
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb02020
Two-component system
gpb02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HDN1F_09270
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
HDN1F_09270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
gpb02035
]
HDN1F_09270
Bacterial motility proteins [BR:
gpb02035
]
Flagellar system
Chemotaxis proteins
MCPs
HDN1F_09270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
PAS_4
PAS_3
PAS_9
PAS
PAS_8
FKBP15
DUF4200
Motif
Other DBs
NCBI-ProteinID:
CBL44510
LinkDB
All DBs
Position
1144041..1145348
Genome browser
AA seq
435 aa
AA seq
DB search
MFGFGAHEREALKKLESKYARSKSIIASLKACNAVVEFDLEGVIVDVNQSFLVAMGYGDR
AELLGKSHAILCDPDTASAETRQLFARLARGEPCFGRYARRGKQSNTVWLRGTYVPLTHE
GQVFRIAFLAHDVTSSAEERLHQRAILDALDRSLAVIEFSPDGTILAANQNFLAFFGYRL
EEVQGKHHRSFCTEQFYRDHPNFWGELAHGSFTSGIYERRAKDGRILWLQATYNPVVDEK
GRVLKIVKLASDITARIETEQATQQAAEIANTTSEETAQIAANGAQLLQDSVQISNTIAS
QIEDTARLVGELNAKSAEISAIVTTISSIAQQTNLLALNAAIEAARAGEHGRGFAVVADE
VRNLASRTNTSTGEIDEMVKANQDLTQTAMERMQRVSEQAHEGSELINRAAAVIEEIREG
AENVSKTVAALGHHR
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttttggtgcgcacgaacgcgaggcgctaaaaaaactcgaatctaagtatgca
agatccaagagcattattgcttcgctaaaagcctgtaatgcggtggtagagttcgacctt
gagggtgtgatcgtcgacgtaaaccagagttttttagtggcgatggggtacggcgaccgc
gccgaactgcttggtaaatcgcacgcaattctgtgcgatccagatactgcaagcgccgaa
actcgccagctttttgcgaggcttgcgcgtggtgaaccttgttttgggcgctacgcgagg
cgcggcaagcaatctaacacggtatggttgcgcggcacctacgtgccgttaacgcatgag
ggccaagtctttcgcatcgccttcctcgctcacgacgtaaccagcagcgcagaagagcgt
ctgcaccagcgggcgattctcgatgcgctagatcgttcgcttgcggtgattgagttctct
ccggatggaaccattcttgccgcgaatcaaaatttcctagcgttttttggctaccgcctt
gaggaagtgcaaggaaagcatcaccgctcgttctgcaccgagcagttctaccgagatcac
cccaacttttggggcgaacttgcacacggttcgtttacctctggcatttatgagcgtcgc
gcaaaagatgggcgaattctctggctgcaggccacgtacaacccagtggtagatgaaaag
gggcgagtgctaaagattgtaaagctggccagtgatattacggcgcgaatcgaaaccgag
caggcgacccagcaagccgccgaaatcgccaatacgacctctgaagaaacggcccaaatt
gccgcaaacggcgcccagttgcttcaagatagtgtgcaaatatcaaacaccatcgcaagc
cagattgaagatacggcacgcttggtaggtgaactcaacgccaagtctgcagaaatctca
gcgatcgtaaccacgatcagcagcattgcccagcaaaccaacctgttagccctgaatgct
gcaattgaggcggcacgcgcgggtgagcacggacgaggctttgcggtggtggccgatgaa
gtacgcaaccttgcctcccgcaccaacacgtctactggcgaaattgatgaaatggtcaaa
gccaaccaagaccttacccaaaccgcgatggagcgtatgcagcgggtcagcgaacaggct
catgagggcagcgagctgattaaccgggcagccgccgtaatcgaagaaattcgtgagggt
gcagagaacgtatcgaagactgttgcagcgctcggccatcatcgctag
DBGET
integrated database retrieval system
