Gamma proteobacterium HdN1: HDN1F_10200
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Entry
HDN1F_10200 CDS
T01300
Symbol
rluB
Name
(GenBank) Ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
gpb
Gamma proteobacterium HdN1
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gpb03009
]
HDN1F_10200 (rluB)
Enzymes [BR:
gpb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
HDN1F_10200 (rluB)
Ribosome biogenesis [BR:
gpb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HDN1F_10200 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
CBL44603
UniProt:
E1VIG1
LinkDB
All DBs
Position
1274011..1274859
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AA seq
282 aa
AA seq
DB search
MSEKLQKVLARAGIGSRRSMEDWIASGRVSVNGKKAKVGDRVERGDVLRVDGRSMDYSGE
DSDSRRMIIYYKPEGEVCTRTDPEGRPTVFDRLPRLDNERWVAVGRLDVNTQGLLLFTTD
GDLANRLMHPSSEIEREYAARIFGEVTPEMLHNLRTGVQLFDGPAHFDEILHSGGEGMNA
WYHVIIKEGRRREVRRMWETQGVQVSRLIRVRYGCVTLPRGLKAGRWEELSEDQISELAQ
LCGAGLRKRTGLYGRPKMRAEKEAPPVMENVKRGGYLRRRRY
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaaacttcagaaggttcttgcgcgtgcgggcatcggctcgcggcgttccatg
gaagactggattgcttctggtcgggtcagtgtcaatggaaaaaaggcaaaggtcggcgac
cgtgtggaacggggcgacgtgttgcgcgtagatggacgttctatggattacagtggcgaa
gattcggacagccgccgtatgattatctactacaagccggaaggcgaggtctgcactcgc
accgatccggaagggcggcctactgtttttgatcgcctgcctaggctggataatgaacgt
tgggtagcggttgggcggcttgatgtaaacacccaaggcctactattgtttacaacagat
ggcgatttagcgaatcgcttgatgcatccctcttcagaaatcgagcgcgaatatgcggca
cgaatttttggcgaggttacgccggaaatgctgcacaaccttagaactggcgtccagctg
ttcgatgggccggcgcatttcgatgagatccttcattctggcggcgaaggcatgaacgcg
tggtatcacgtgatcatcaaagaagggcgccgtcgtgaagtgcggcggatgtgggagacg
caaggtgtacaggtttcccgattgatacgcgttcgctacggttgcgtcactctgccgcgc
ggcctgaaagcggggcgctgggaagaattgagcgaagatcaaattagcgagctggcgcag
ctctgcggagccggcttacggaagcgtacaggcttgtatggccgccccaaaatgcgtgct
gaaaaagaagcgcctcccgtaatggaaaatgtgaagcgaggcggatatttgagacgtcgt
cgctattga
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