Gamma proteobacterium HdN1: HDN1F_10240
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Entry
HDN1F_10240 CDS
T01300
Symbol
gyrA
Name
(GenBank) DNA gyrase (topoisomerase II) A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
gpb
Gamma proteobacterium HdN1
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gpb03032
]
HDN1F_10240 (gyrA)
03400 DNA repair and recombination proteins [BR:
gpb03400
]
HDN1F_10240 (gyrA)
Enzymes [BR:
gpb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HDN1F_10240 (gyrA)
DNA replication proteins [BR:
gpb03032
]
Prokaryotic type
DNA Topoisomerases
HDN1F_10240 (gyrA)
DNA repair and recombination proteins [BR:
gpb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HDN1F_10240 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
CBL44607
UniProt:
E1VIG5
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All DBs
Position
1277627..1280329
Genome browser
AA seq
900 aa
AA seq
DB search
MSELAKEILPINIEDELKKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELSNHWN
KPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQYFSLRYMLVDGQGNFGSIDGDNPAAM
RYTEVRMAKIAHELLADLDKETVDFVPNYDGSEQMPSVLPTKVPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDACFAFMDDSEITIEGLMKHIQGPDFPTYGIINGRAGIIEAYRTGRGRI
RIRARATVERDAKTGRDSIIVTEIPYQLNKARLIERIAELVKEKLIEGITELRDESDKNI
RIVIEVRRGENADVVLNNLYSQTQMESVFGINMVALVDGQPRLLNLRGVIEAFVRHRQEV
VTRRTVYELRKARERAHILEGLAVALANIDPVIELIKSSASRAEAEERLLAQGWQPGNVI
AMLERAGEAHACRPEGLPAHYGLRNGLYYLSDVQAREILEMRLHRLTGLETEKLIQEYQE
KLEIIRELLAILASRERLMQVIRDELTAIREGFADARKTEIVASQLDINDEDLIPEETVV
VTLSNDGYAKTQPLDHYQAQHRGGRGKAAAQVKEEDCIEHLLVVSTHDTILCFTSAGKVF
WLKVYQIPQAGRQAKGRPIVNLLSLGENEKITAILPLRGYDGDRFVFMATSNGTVKKVAL
QEFSRPRSQGLIALELEENNRLVGVAITEGHQDIMLLSSEGKAVRFDENEVRAMGRTARG
VRGMNLPEDAAVIALIVPDPDAQILTACENGFGKRTLVSEFPTKGRGGKGMIAIRTSERN
GKLMGAVQVNDGNEVMLISDQGTMVRIRADEVSLMGRDTQGVTLIRLNEGERLVGIEQVE
EVSDAAVEEAKASGAKKLRATDFNGESVEGIDDAEQDKTGNNGSGDTDESDDVFDGNDAE
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagctcgcaaaagaaattcttcctatcaacatcgaagacgaactgaagaaatcc
tacctggattacgcgatgagcgtaatcgttggacgcgccttgccagacgtgcgcgacggc
ttgaagccggtgcaccggcgcgtgctgttcgcaatgaacgaacttagtaaccattggaat
aaaccatacaaaaaatcggcgcgcatcgtcggcgatgtaatcggtaaataccacccacac
ggtgacactgctgtctacgacaccattgtgcgtatggcgcagtatttctcgctgcgttac
atgttggtagacgggcaaggtaattttggctccatcgacggagacaacccagcggcaatg
cgctacacggaagtgcgtatggccaagattgcccatgagctgctcgccgatctcgataaa
gagaccgttgatttcgtcccgaactacgacggctctgaacaaatgccgtcggtattgccg
acaaaggttcccaacctgcttgtgaatggcagttcgggtatcgcggtagggatggcgaca
aatattccgccgcacaatcttggcgaagtcatagatgcgtgttttgcttttatggacgat
tccgagatcaccatcgaaggcttgatgaagcacatccaaggccccgattttcccacctac
gggatcattaatgggcgtgcgggcattatcgaagcctatcgaacagggcgtgggcgtatc
cgcatacgtgcgcgtgcaacggtggagcgcgacgcaaaaaccggccgagattccatcatc
gtcacggagattccttaccagctcaacaaagcgcggctgattgagcgcattgccgagctt
gtgaaagaaaagctaattgagggtattaccgagctgcgtgacgaatcggataaaaatatc
cgtatcgtgattgaagtgcggcgcggcgaaaatgccgatgttgtgctgaacaatctttac
tcgcaaacgcagatggagagcgtgttcggcatcaacatggtggcactcgtagatggtcag
ccacgcttgttgaatctgcgcggtgtgattgaagcatttgttcgccaccgtcaggaagtg
gtaacgcgtagaaccgtatacgaattgcgtaaggcgcgcgagcgcgctcatatcttggaa
ggcttggcggtagcacttgcgaacattgatccagtcattgaactgatcaaatcttctgca
agccgcgctgaagcagaggaacgcctgcttgcgcaaggctggcagccaggcaacgtgatc
gccatgttggaacgtgcgggagaggcgcacgcctgtcgcccggagggtttgcccgctcac
tatggtcttcgcaatggtctctattatctctccgacgtgcaagcgcgcgagattctagaa
atgcgtctacaccgcttgaccggtttggaaaccgagaaacttatacaagagtatcaggaa
aaacttgagatcattcgtgagctgctggccattctcgccagccgcgagcgcttgatgcag
gtaattcgtgatgagctcaccgcaatccgcgaaggcttcgcagatgcacgtaaaaccgag
attgttgcctcgcagttggatatcaacgacgaagacttgattccagaagaaacagttgtt
gtcactctctccaacgatggctatgcgaaaacccagcctttagatcactaccaagcgcaa
caccgtggcggccgaggcaaggccgcggcgcaggtcaaagaagaagattgtatcgagcat
ctattggtcgtcagcactcacgacacaatcctttgctttaccagtgcaggcaaggtgttc
tggctgaaagtttaccagattccgcaagcaggtcgccaagccaaagggcgcccgatcgtg
aacctgctgtcgcttggcgagaatgaaaagatcactgcgatcctaccgttacgaggctac
gacggcgatcgtttcgtgtttatggcgaccagcaacggcaccgtcaagaaagttgcgctg
caggaattttcacgcccgcgcagccaaggtctgattgcgctagaacttgaagaaaacaac
cggcttgtgggcgtcgcaattacagaaggtcaccaagacatcatgctgctaagctcagaa
ggcaaggcggtgcgttttgatgaaaatgaagttcgcgcgatggggcgtactgcgcgtggc
gtgcgcggcatgaatttgcccgaagatgccgcggtcattgcgctgatcgtgccagaccct
gatgcgcaaatccttacagcttgtgagaatggctttggtaagcgcaccttggtttcggaa
tttcctacaaaaggacgcggcggaaagggtatgattgcgatccgtaccagcgagcgcaac
ggtaagctgatgggcgcggtgcaagtgaacgatggcaacgaggtcatgctcattagcgat
caaggcacaatggtgcgaattcgtgctgacgaagtctccttgatggggcgggatacccaa
ggcgtcaccttgattcggctgaatgagggcgagcgcttggttggcattgagcaagtcgaa
gaagtcagcgacgctgcagttgaggaagcaaaggcgtcgggcgctaaaaagctgcgcgca
acggacttcaatggtgaaagcgtcgaaggcattgatgatgcagagcaagacaaaacaggc
aataacggctcgggcgatacagatgaatccgatgatgttttcgatggtaacgacgcggaa
taa
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