Gamma proteobacterium HdN1: HDN1F_10340
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Entry
HDN1F_10340 CDS
T01300
Name
(GenBank) Periplasmic tail-specific protease
KO
K03797
carboxyl-terminal processing protease [EC:
3.4.21.102
]
Organism
gpb
Gamma proteobacterium HdN1
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gpb01002
]
HDN1F_10340
Enzymes [BR:
gpb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.102 C-terminal processing peptidase
HDN1F_10340
Peptidases and inhibitors [BR:
gpb01002
]
Serine peptidases
Family S41: C-terminal processing peptidase family
HDN1F_10340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_NTD
Peptidase_S41
DUF3340
PDZ
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-ProteinID:
CBL44617
UniProt:
E1VIH5
LinkDB
All DBs
Position
complement(1291768..1293882)
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AA seq
704 aa
AA seq
DB search
MLNILSSFARKTALVTFCALIASTTAWSLTGIKVNDLGPNRQQAITALMVVKRLEQLHYN
HQRLDDTLSATILDRYLNDLDPAHSYFLASDIKEFEKYRFEMDDALVNGNLSPAFAIFNR
YQHRMVDRLAYLDVLLNREFDQWQYTTNDTVEADRKQAPWPANQSEWDDLWRKRLMYTAL
NMKLTGKSPAKIKKTLERRYKSQLTRALQVNSDDAFQIFLNSVTQTYDPHTQYLSQKVSE
NFNINMSLQLEGIGAVLQAEDEYTKIQSLVTGGPADRSKLLHPADRIVGVAQEGDKDVVD
VVGWRLDEVVERIRGKKGTKVTLQIIPAGSSNEHETKLVTITRDQVKLEDRAAQSTIIET
KHDGKAYKIGVINVPAFYLDFQCTQHDEANCRSTTRDVAALINKLKKQNIDGLIIDLRNN
GGGALQEANSLVGLFIERGPTVQIRSSGGKIDTMLDTDPRVAYTGPLAVVVNRLSASASE
IFAGAIQDYRRGVIVGERTFGKGTVQSMQQLDQGQLKITLAKFYRISGDTNQNKGVSPDI
AMPSLLDHEELGESALFNALPADTIRPAHYDKDRGLEAAIPLLRENAEQRIRANPDFMYL
NEQVKLLDEARAAKTVSLNEKTREAEQTKLDSQRLKLENDRRKGKHETPFKTVADMKKAA
EKDEADALTDHGAIKVDFVLDEASNIVSDVISSTASMNSRVASH
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacatattgagttctttcgcccgcaagacggcacttgtgaccttctgcgctctg
atcgccagcaccactgcttggtcgctcaccggaatcaaagtgaatgacctcggccctaac
cggcagcaggctattaccgcacttatggtagtcaagcggctggaacagctgcactacaat
caccaacgccttgacgacactctctctgcaaccatcttagatcgctatctcaacgatctc
gatccagcgcacagctactttcttgcctctgatatcaaagagttcgaaaaatatcgcttt
gaaatggacgacgcgcttgtcaacggcaatttaagccctgccttcgcaatatttaaccgt
tatcagcaccgcatggtggatcgccttgcctatcttgatgtattgctgaaccgcgagttc
gaccaatggcaatacaccacaaacgatacggttgaagcggatcgcaaacaggccccatgg
cctgccaatcaaagcgagtgggatgatttgtggcgtaagcgcctcatgtacaccgcactc
aacatgaagctcacgggcaaatcgccagcaaagatcaaaaaaaccttggaaagacgctac
aaatctcagctgactcgcgcgctgcaagtgaacagcgacgacgcgttccaaatttttctt
aattcggtcacacagacctacgacccgcatacccaatacctctcccaaaaggtatctgaa
aacttcaatatcaacatgagcttgcagctggaaggcatcggcgccgtgctgcaagcggaa
gatgagtacaccaaaatacaaagcctcgttaccggcggtcctgctgaccgcagcaaactc
ctacaccctgcggatcgaattgtcggcgtcgcccaagaaggcgataaagatgtcgtagac
gtcgtcggctggcgccttgacgaggttgtagaacgcatccgtggaaaaaaaggcactaaa
gtcacccttcaaatcattcctgctggcagcagtaacgagcacgaaaccaagctcgtcacg
atcacgcgcgatcaagtgaaactagaagatcgagccgcacaatccaccattattgagaca
aagcacgacggcaaagcctacaaaattggggtcatcaacgtccccgccttctatctagac
tttcaatgtacccaacatgatgaagccaactgccgctcaacaacgcgcgacgttgccgca
ctaatcaacaagctgaaaaagcaaaacatcgacggattgatcattgatcttcgcaacaac
ggcggcggcgccctacaagaagcaaactcgctagtaggcttgttcatcgaacgcggccct
acagtgcaaatccgcagctctggcggcaagattgacaccatgctcgacaccgatccgcgc
gtcgcctacacgggaccgctcgcagtggtcgtcaaccgcctgagcgcgtctgcgtcagaa
attttcgccggcgcgatccaagattatcggcgcggagttatcgtaggggaacgcaccttt
ggtaagggtaccgttcagtccatgcagcaattggatcagggccagctcaaaatcacgctg
gcaaagttctatcgcatctctggcgacaccaaccaaaacaaaggggtctcacccgatatc
gcaatgcccagcctgcttgaccacgaagagcttggcgaaagcgcactcttcaatgcactc
ccagcagatacgattcgccccgcacactacgataaagatcgcgggcttgaagcggccatc
cctttgctgcgggagaatgctgaacagcgaattcgcgcaaatcctgactttatgtatcta
aacgagcaggtaaagctacttgatgaagcgcgagcagctaagacagtatctttgaacgaa
aagacccgcgaagcagaacagaccaagcttgattcacagcgcctgaaacttgaaaacgat
cgccgcaaaggtaaacatgaaacgcctttcaaaacggttgctgacatgaaaaaagcggcc
gagaaagacgaggccgatgcccttaccgaccacggcgcaatcaaagtagattttgtgctt
gatgaagccagcaatatcgtgagtgacgtaatctcttccactgcgtcaatgaacagccgg
gtagcatctcactaa
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