Gamma proteobacterium HdN1: HDN1F_11860
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Entry
HDN1F_11860 CDS
T01300
Symbol
selU
Name
(GenBank) Putative 2-selenouridine synthase
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
gpb
Gamma proteobacterium HdN1
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gpb03016
]
HDN1F_11860 (selU)
Enzymes [BR:
gpb01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
HDN1F_11860 (selU)
Transfer RNA biogenesis [BR:
gpb03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
HDN1F_11860 (selU)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_16
T2SSE
AAA_22
AAA_30
TsaE
AAA_11
SMC_N
ResIII
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
CBL44769
UniProt:
E1VIX7
LinkDB
All DBs
Position
1470191..1471294
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AA seq
367 aa
AA seq
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MYELNELPELTDYSSLFLNDVPMMDVRAPIEFKQGSFPMATNVPLLDNAQREQIGIRYKQ
AGQDAAIDLGLALATSEVRAQRICGWKSYIEKYPQGALFCFRGGLRSRTTQRWLAEQGII
YPRIKGGYKAMRRFLIETLEHACQHQSLICISGRTGSGKTDVLLQLRHYLDLEGRAHHRG
STFGNTVYPQPAQIDFENAVAIDFLKHAHYHSGVSLFIEDESRLIGRIALPPNLQAAIKR
APRVLLEEHEDAREQRVLRDYILVQREQFKRCYGADAAPRFASFVLDNLARIEKRLGSER
HDRIRAEWQAGLVEFENSGNAERFVPGIRCLLSEYYDPMYDYQITQRDSPILWQGDAAGL
VEWARSL
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaattaaatgaattgccagaattgaccgattattcatctctgtttctcaacgat
gttccaatgatggatgtgcgcgcgccgattgaatttaagcagggtagttttccgatggcc
accaatgtgcctttgctggataacgctcagcgtgaacagattggtatccgttacaagcag
gctgggcaggatgcggccattgatttaggcttggcgttggctacgtctgaggtgcgggca
caaagaatttgtgggtggaaatcctacattgaaaaatacccgcaaggtgcgcttttttgt
tttcggggcggattgaggtcgcgcacaacccagcgctggcttgcagaacagggaatcatc
tatccgcgcataaaaggtggctataaagccatgcggcgctttttaattgaaacgctggag
cacgcctgccagcatcagtctttgatctgcatttccggccgaacgggaagcggtaaaact
gatgttttattgcagctcaggcattatctcgatctggaaggacgcgcccatcaccgagga
tcaacgtttggaaataccgtttatcctcagcccgcgcagattgattttgaaaacgcggta
gccattgattttctcaaacatgcacattaccactcaggtgtgtcgttatttattgaggat
gaaagccgcttgattgggcggattgccttgccgcctaacttgcaggcggcaataaagcgt
gcgcctcgtgtattattggaggagcatgaggatgcgcgtgaacagcgcgttcttcgggat
tatattttggtgcagcgcgaacagtttaagcgttgctacggggcagatgctgcgccgcgc
tttgcgtcttttgtgctggataatctcgcccgcatcgaaaagcgcttaggtagcgaaaga
cacgatcgcatccgcgcagagtggcaggcggggcttgttgaatttgaaaatagcggcaat
gccgagcgttttgttccaggaattcgttgtttgctgagcgagtattatgatccgatgtac
gattaccagatcacccagcgcgatagcccgattctttggcagggcgatgctgcgggcttg
gtagaatgggcgcgttcgctttga
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