Gamma proteobacterium HdN1: HDN1F_13840
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Entry
HDN1F_13840 CDS
T01300
Symbol
ispB
Name
(GenBank) Polyprenyl synthetase
KO
K02523
octaprenyl-diphosphate synthase [EC:
2.5.1.90
]
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb00900
Terpenoid backbone biosynthesis
gpb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
HDN1F_13840 (ispB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gpb01006
]
HDN1F_13840 (ispB)
Enzymes [BR:
gpb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.90 all-trans-octaprenyl-diphosphate synthase
HDN1F_13840 (ispB)
Prenyltransferases [BR:
gpb01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
HDN1F_13840 (ispB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
CBL44967
UniProt:
E1VJH5
LinkDB
All DBs
Position
complement(1728190..1729158)
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AA seq
322 aa
AA seq
DB search
MQSLSMRALVADDFIAVDEIIRQQIQSKVALVQTIGDYIISAGGKRLRPLLVLLGGRAVG
YHKEDLRILAATIELLHTATLLHDDVVDKSGLRRGRATANAQWGNAPSVLVGDYLYSRSF
EMMVGLGNMPVMKILSQATRIMAEGEALQLSRVRDVSTSEETYMQIIRSKTSVLLEASSH
SAAVLASATDYERHALRGFGEHLGIAFQLIDDVLDFRGDSQALGKNIGDDLAEGKPTLPL
IFTMREGNAESAKLIHNAILEGGSPDIEAIRSAVETAGGLEYTANKAHEHALLACHHLDA
LPDSPYRQALHDLSHFAVARSH
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccctttccatgcgtgcactcgtagcagacgactttattgcggttgacgaaatc
atcaggcaacaaattcaatcgaaagttgcgctcgtacaaaccattggtgactacattatt
tcagcaggcggaaagcgcttgcggccattattggtattattaggcggacgtgccgttggt
tatcacaaagaagatctgcgcatattagctgccacgattgaactactacatacagcaacc
ctgctacatgatgatgtcgtagataaatccggcctacgcagaggtcgtgctaccgcaaat
gcacagtggggaaacgctccgagcgtactggtcggcgattacctctattcgcgttctttc
gaaatgatggtcggccttggcaacatgcccgttatgaaaatcctctcccaagctacacgc
atcatggcagaaggcgaagcgctgcaactttcacgcgttcgagacgtgagcaccagcgaa
gaaacctatatgcagatcattcgcagcaaaacctccgtattgcttgaggcatccagccac
agcgctgcggtactcgctagcgctaccgattacgagcgccatgccctgcggggattcgga
gaacatcttggtatcgccttccaactgattgatgacgtgcttgatttccgcggcgacagc
caagcacttggaaaaaacatcggtgatgatctcgcagaaggaaaacccacactgcctctc
atttttaccatgcgcgaaggaaatgcagaaagcgcaaaactcattcataacgcgatcctt
gagggcggaagccccgacatcgaagccattcgaagcgccgtagaaaccgcaggcgggcta
gaatacacagcaaacaaagcgcacgaacatgcactgcttgcctgccaccaccttgacgca
ctgcccgattcgccttaccgccaagccctgcacgacttaagccattttgccgttgcgcgc
agccactaa
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