Gamma proteobacterium HdN1: HDN1F_14790
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Entry
HDN1F_14790 CDS
T01300
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor for flagellar operon (Sigma-F factor)
KO
K02405
RNA polymerase sigma factor FliA
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb02020
Two-component system
gpb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HDN1F_14790 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HDN1F_14790 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gpb03021
]
HDN1F_14790 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
gpb02035
]
HDN1F_14790 (fliA)
Transcription machinery [BR:
gpb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HDN1F_14790 (fliA)
Bacterial motility proteins [BR:
gpb02035
]
Flagellar system
Flagellar assembly proteins
Stator
HDN1F_14790 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
CT_C_D
ASL_C
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
CBL45062
LinkDB
All DBs
Position
1841584..1842318
Genome browser
AA seq
244 aa
AA seq
DB search
MNLANRRPMYTEQAHASLDTLVEQHLPLVRRIAHHMIGRLPSNVIVDDLIQAGVIGLIDA
LQKYDTGKGASFETYAGIRIRGAMIDEIRRGEWAPRSVHRNARAIQDAIRNVEARVQRDA
TDREVAEELGVPLDAYHAMAQDSMATRLFSMEELTAPESIIDRGDLQQAHDNPASHFQRD
MMLTSMANAIKDLPEREQLVLSLYYDEELNLKEIGEVLGVSESRVCQIHSQATHRLRARL
RDWR
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaatttggcgaatagacggcctatgtataccgagcaagcacatgcatcgttagatacg
ttggtggagcagcatcttccgctggttcgtcgtattgcgcaccatatgataggcaggctt
ccgtccaatgtgattgtggatgacttgattcaggcgggtgtgattggcctgattgatgcg
ttgcaaaaatacgacaccggcaaaggcgcaagttttgaaacctatgcgggaattcgtatt
cgtggtgcgatgatcgacgagatccgccgcggtgagtgggcacctcgctcggtgcatcgc
aatgcgcgcgcgattcaggatgcaattcggaatgtagaggcacgcgttcagcgcgacgcg
acagaccgtgaggttgccgaggagttgggtgtgccgttagatgcctatcatgcgatggca
caggacagcatggcgacgcgtctttttagcatggaagaactcaccgcgccggaatccatt
attgatcgtggtgaccttcagcaagcgcatgataatcctgcgagccacttccaacgcgat
atgatgttgacgagcatggcaaacgcaatcaaagacttacctgagcgcgagcagcttgtt
ttatcactctattacgatgaagagctgaacctgaaagaaattggtgaagtgctcggtgtg
agtgaatcacgggtttgtcagattcatagccaagccacccatcggctgcgcgcacgcctt
cgcgattggcgctga
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integrated database retrieval system
