Gamma proteobacterium HdN1: HDN1F_15480
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Entry
HDN1F_15480 CDS
T01300
Symbol
cpaC
Name
(GenBank) Probable outer membrane channel protein
KO
K02280
pilus assembly protein CpaC
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HDN1F_15480 (cpaC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
gpb02044
]
HDN1F_15480 (cpaC)
02035 Bacterial motility proteins [BR:
gpb02035
]
HDN1F_15480 (cpaC)
Secretion system [BR:
gpb02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
HDN1F_15480 (cpaC)
Bacterial motility proteins [BR:
gpb02035
]
Pilus system
Pilus assembly proteins
HDN1F_15480 (cpaC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
SsgA
Motif
Other DBs
NCBI-ProteinID:
CBL45131
UniProt:
E1VJY9
LinkDB
All DBs
Position
1971414..1972826
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AA seq
470 aa
AA seq
DB search
MVYKPNLLSILNNKNIEKTQKDHGSMGKITAVTRIWLAFITAFFWCATHANAAEPVPPGY
DDVISIVQGQTTLLPFPNVVRVSIGEENLANAQPAGANEILLTGLKAGVTDLRIWPEHGK
AKRYLLKIIDNTWTRVLELSNTVLADIEGVSAREDNGIVLIEGRLLREQDAAVIADLKAK
LKKEVKEGKVVFNVVLPNVKLAAMVMLDVHVVEVRKQDLKKLGVQWDSATAGPAYGVLGQ
FRGAGNFEKDTSVFGFLMTENRSPIKVGNGYIGTSIGSKLNFLQSNGVAHVLAQPKLVTR
SGSEASFLAGGEIPIPTVTKDNQINTIFKQVGVILKISPKADPDGFIETAINVEVSQVDA
SVQVLGIPGFITRKTKMEMNVQSGQTMAISGMLSEESSKAIDKMPGLGSIPILGELFKSR
DFRQNTTELMIFVTPYLVDPDSEQNKELLANSKKLDQNGKKEARRFSIMD
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggtgtacaagccgaatctgctgtccatcctgaataacaagaacattgaaaaaacacag
aaggatcatggttccatggggaaaatcaccgctgtaacacgcatctggctggcttttatc
accgcatttttctggtgcgccacccacgccaacgccgccgaaccggtaccgccggggtat
gacgacgtaatatccatcgtacagggccagaccacgcttttgccttttcctaacgtagtg
cgtgtttccatcggtgaagaaaacctcgccaacgcccaacctgcaggcgccaacgaaatc
ctcctcaccggcctcaaggcaggcgttaccgatttgcgcatctggccggaacatggcaag
gccaaacgctacttgctcaagattatcgacaacacttggacgcgcgttcttgagctttca
aatacggtccttgctgacatcgaaggcgtaagcgcacgcgaagacaatggcatcgtacta
attgaaggccgcctcctgcgtgaacaagatgctgcagtgatcgccgatcttaaagccaag
ctcaaaaaagaagtaaaagaaggcaaggtggtctttaacgttgtgctgcctaacgtcaaa
ttggccgccatggtgatgctggatgtccacgtggtagaagttcgcaaacaagacctgaaa
aaactcggcgtgcagtgggattccgccaccgctggcccagcttacggcgtgcttggccag
ttccgtggcgcaggtaatttcgaaaaagataccagcgtgtttggctttctgatgactgaa
aacagaagcccgatcaaggttggcaacggctacatcggcacatccattggctctaagctc
aatttcttgcaaagcaatggcgttgcgcacgttctggcgcagcctaaactggtgacccgt
tccggctcagaagcatctttcttggccggtggcgagatcccgattcccaccgtcaccaaa
gacaaccagatcaacaccatcttcaagcaagtgggcgtcatcctgaaaatttcacccaag
gctgacccagatggctttatcgaaacagcaatcaacgtagaagtcagccaagtcgacgca
agcgttcaggtgttgggtattccaggcttcattactcgcaaaaccaaaatggagatgaac
gtccaatccggtcaaactatggcgatctctggcatgttgtccgaagagagcagcaaagcc
atcgacaaaatgcccggcctaggctccatcccgatcttgggcgagctcttcaaatcgcgc
gattttcgccagaacaccactgagttgatgattttcgtaacgccgtaccttgtggaccct
gatagcgagcaaaacaaagagttgttggctaacagcaaaaagctagatcaaaacggcaaa
aaagaagcacgccgcttctccatcatggactga
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