Gamma proteobacterium HdN1: HDN1F_16540
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Entry
HDN1F_16540 CDS
T01300
Symbol
clpX
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
gpb
Gamma proteobacterium HdN1
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
gpb03110
]
HDN1F_16540 (clpX)
Chaperones and folding catalysts [BR:
gpb03110
]
Heat shock proteins
HSP100
HDN1F_16540 (clpX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
zf-C4_ClpX
AAA
ClpB_D2-small
AAA_5
AAA_22
Mg_chelatase
RuvB_N
DEAD
Sigma54_activ_2
MCM
AAA_14
AAA_18
Sigma54_activat
AAA_16
AAA_24
SMC_N
AAA_7
AAA_23
IstB_IS21
ABC_tran
T2SSE
nSTAND3
AAA_28
AAA_33
NACHT
ResIII
AAA_29
AAA_15
TIP49
TsaE
HVO_2718
PduV-EutP
Motif
Other DBs
NCBI-ProteinID:
CBL45237
UniProt:
E1VK95
LinkDB
All DBs
Position
2090851..2092155
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AA seq
434 aa
AA seq
DB search
MAEDRSGKGDDGGKLLYCSFCGKSQHEVRKLIAGPSVFICDECVDLCNDIIREEVQEENA
DNKSDRLPSPKEIKTILDDYVIGQDRAKKILAVAVYNHYKRIRSGNAKSAKGRGEGDIEL
SKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCD
YDVEKAQVGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKH
PQQEFLQVDTTNILFICGGAFAGLEKVIQNRSTKSGIGFVASVKSKEDNINVGDTLKEVE
PEDLVKFGLIPEFVGRLPIIATLEELDEAALVRILTEPRNSLTKQYQKLFEMEDIELDFR
TDALHAVAKKALERKTGARGLRSILENVLLDTMYDAPSLEGVTKVVVDEAVIKGDSEPLM
IYERAEAPPKAAPE
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagatcggtctggaaagggtgatgacggcggcaagctgctctattgctctttt
tgcggtaagagtcaacatgaggttcgcaagctgatcgcagggccatccgtgttcatctgt
gatgaatgcgtcgatttatgcaatgacattatcagggaggaggtccaagaggagaacgct
gacaacaagagcgaccgtctgccgtcccccaaagaaatcaaaaccatacttgatgattat
gtcattggccaagatcgtgcaaaaaaaattctcgcagtagcggtttacaaccactacaag
cgtattcggtcggggaacgcaaagagcgccaaaggccggggcgagggcgatatagagctt
tccaagagcaatattctcctgattggtcccacgggtagtggcaaaactctgcttgccgaa
accttggcgcgcctgcttaacgtacctttcaccatcgctgacgcaacgacgctcaccgag
gcgggctatgttggggaggatgtcgagaacatcatccaaaaattgttgcagaagtgcgat
tatgatgtagagaaggcgcaggtcgggattgtatacattgacgagatcgacaagatttcg
cggaagtctgaaaacccgtcaatcacccgtgatgtttctggtgagggtgtgcaacaagcg
ctgctgaagctgattgaaggcaccgtcgcatcggttccgccgcaaggtggccgcaagcac
ccacagcaggagtttctgcaggtcgatacgacgaacatcctgttcatctgtggtggggct
ttcgcgggcttggagaaggtaatccagaatcgctcgaccaagagcgggattggcttcgtt
gcttcggtcaagagcaaggaagacaacatcaacgtcggtgatacgctcaaagaagtagag
cctgaggatttggtaaagtttgggcttatccccgaatttgtcggacgtttgccgatcatt
gcaaccttggaagagcttgacgaggctgccttggtcagaattctgactgagccacggaac
tcacttactaagcaatatcaaaagctgtttgagatggaagacattgagctggatttccgt
acggatgccttgcatgcggtagccaaaaaggcgctggaacggaaaaccggagcacgcggg
ttgcgctctattctcgaaaatgttctgttggatacgatgtacgatgcgccttcactagag
ggcgttactaaagtagtcgtagatgaggcggtgataaagggcgattctgaaccactgatg
atctacgaacgcgcagaagcaccacccaaggctgcacctgaatga
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