Gamma proteobacterium HdN1: HDN1F_18810
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Entry
HDN1F_18810 CDS
T01300
Name
(GenBank) Hypothetical protein
KO
K23127
cyclic-di-GMP-binding protein
Organism
gpb
Gamma proteobacterium HdN1
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HDN1F_18810
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FimW_M
FimW_N
FimW_C
DUF6415
Motif
Other DBs
NCBI-ProteinID:
CBL45464
LinkDB
All DBs
Position
complement(2337474..2339405)
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AA seq
643 aa
AA seq
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MPSILQERGKTRAYYPPHLPPRIQGSGMPAADGIPLKIPPQDLAILSFAQPNAKRVREWV
NSLPQMNVGETSKQVYAAVQELTRLRTDSETRFQMLEALRGPIHFICNALSKHFLDKAVV
LPPREAKIANLAQALQNHLATGYKVVASQVLERSRQGDRAARMMITRALHRALTEMLLVM
LRSHQLYFPAPPGYWRETHQIFLLAESLNILDQNVEDDQEQQLSTTIYDAYRRSLLMATA
RPNQLRQTQHELVHQATASWFRYCDVLPLLENKGLYTLNLDADTPPAYAALQKLSDERPL
NRCFDASRVSDLLRTQLQLSTGQTHPESGFTLPSGMLPDLIRILIQAWGVLTERAFTRIE
EAGQIRLCIGLSATHYFVSDRQDFARQMRNVPSAMLQLEESNRFMAGGPTHRRDVIDETD
VWGLQLDRHVTMGNKASSIEEQVLKHDQKQQESVESDKYPSYSCDIINTSPGGFCVGWKQ
DIPPHVKTGEIIGVKEHEDQPWSIGVIRWVKQFRNEGARMGIELLAPRADACGTQVIQKK
GGATEFMRTLILPELRAIGQPATLITPNIAFAVGSKINLNQNSTISKAQLIKQVGATASF
CQFQFKQLSLSDTETPSGPTSGSSKPAAKTGKEDDFDSIWSSL
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
gtgccgtctatactccaagaacggggaaaaacgcgcgcgtactacccgcctcatttaccg
ccaagaatacaaggttcgggcatgccagcagcagacggtattccactcaaaattccgcca
caagatctcgccatcttaagtttcgcgcagccgaacgctaagcgtgtgcgcgaatgggtg
aacagcttaccgcagatgaatgtcggcgaaacctcaaagcaggtgtatgccgccgttcaa
gagcttacgcgcctacgcaccgactccgaaacccgcttccagatgctggaggcactgcgc
ggcccaatccactttatctgtaacgccctcagtaagcactttctggataaagccgtcgta
ctgcctccacgcgaagcaaaaattgccaaccttgcgcaagcgttacaaaatcacctcgcc
accggctacaaagtcgtggccagccaggtactagaacgtagccgtcaaggcgaccgcgcc
gcgcgcatgatgatcacgcgcgccctgcaccgcgcattgactgaaatgcttctcgttatg
ctgcgtagccaccagctctattttccggcgcctccaggatactggcgcgaaacgcaccaa
atttttctattggccgagtcactcaacatcctcgaccaaaatgtggaagacgatcaagag
cagcagctctctaccacaatctacgatgcctatcggcgcagcctgctaatggcaaccgcc
cgcccgaatcaactccgccaaacgcaacatgaactcgttcatcaggcaaccgcaagctgg
ttccgctactgtgatgtcttgccgcttcttgagaataagggcctttacaccctaaatctc
gacgcagacacccccccagcctatgccgcgctgcaaaaactttccgatgaacgtccgcta
aaccgctgctttgatgcttcacgcgtttccgacttattgcgcacccaacttcagctatcc
acagggcaaacgcatccagaatcgggctttacgctgccatcagggatgttgccagatctt
attcgcattctcatacaagcgtggggcgtgttgaccgaacgcgctttcacgagaattgaa
gaagccggtcagatccggctctgcattggcctttccgcaacgcactattttgtttccgac
cgtcaggatttcgctcgtcagatgcgtaacgtcccctctgcgatgctgcagctggaagaa
agcaatcgcttcatggcaggcggcccgactcaccggcgcgacgtcatcgacgaaaccgat
gtgtggggcctgcagcttgatcgccatgtcaccatgggcaacaaggcatcttcgattgag
gaacaggtcctcaaacacgatcaaaagcagcaagagtccgtagaatcggacaagtatccc
tcctatagctgcgatattatcaacacaagcccaggcggtttctgcgttggctggaaacaa
gacattccgccccatgtaaaaacgggtgagatcattggcgtcaaagagcacgaagatcag
ccttggagcatcggcgttattcgttgggtaaaacaatttcgcaacgaaggagcgcgaatg
ggcattgaactgctagcacctcgggcagacgcctgcggcacgcaagtaattcaaaagaaa
ggtggcgccaccgaatttatgcgcactttgattctgccggaacttagagcaatcggtcag
cccgcaacactgatcacacccaatattgcctttgcagtaggaagcaagatcaacctcaat
cagaacagcaccatcagcaaagcacagctgatcaagcaagtaggcgcaaccgcaagtttt
tgtcaatttcagtttaagcagctcagcctatcggataccgaaacgccttcgggcccaact
tctggaagctcaaaacccgcagcaaaaacaggtaaagaagacgactttgattccatctgg
tcgagcttgtga
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