Gamma proteobacterium HdN1: HDN1F_19590
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Entry
HDN1F_19590 CDS
T01300
Name
(GenBank) C-5 cytosine-specific DNA methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb00270
Cysteine and methionine metabolism
gpb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
HDN1F_19590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gpb03000
]
HDN1F_19590
03032 DNA replication proteins [BR:
gpb03032
]
HDN1F_19590
03036 Chromosome and associated proteins [BR:
gpb03036
]
HDN1F_19590
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
gpb02048
]
HDN1F_19590
Enzymes [BR:
gpb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
HDN1F_19590
Transcription factors [BR:
gpb03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
HDN1F_19590
DNA replication proteins [BR:
gpb03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
HDN1F_19590
Chromosome and associated proteins [BR:
gpb03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
HDN1F_19590
Prokaryotic defense system [BR:
gpb02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
HDN1F_19590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
CBL45542
UniProt:
E1VL50
LinkDB
All DBs
Position
complement(2439006..2440169)
Genome browser
AA seq
387 aa
AA seq
DB search
MKSLEIFSGAGGLAKGLELSGFKHAAFVEYNKHACASLSENFDRKKVFFGDIQDFDLTVL
DNIDVVAGGPPCQPFSLGGKHRADEDHRDMFPFAINAIEHLMPKAFVFENVKGLLRNSFA
DYFEYIILRLTFPGFKAGKNDDWRDHLIKLRKISLMPYAGVRYDVKYELINAADYGVPQV
RERVIIIGLRSDLNLNWSFPEPTHSQDRLLWDIHVSGEYWEQHRVSAKEKAIVLASTEKM
ANRIYCRYGLLEPEHLPWKTIRDAVSNLPPPKTKHYLEDHAFRDGARTYAGHTGSEYDWP
SKTIKAGDHGVPGGENMIRFPDDSVRYLTILEAKRLQTFPDDFVVKGAWGEAMRQLGNAV
PVKLANIIGDHLYTLLSAKTARKVLRR
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcactcgaaattttttctggcgcgggcggcttagcaaaagggctcgaactatct
ggatttaaacatgcggcattcgttgaatacaacaaacacgcatgcgcctcactaagtgaa
aacttcgatagaaaaaaggtttttttcggcgatattcaagattttgatctaactgtctta
gataacattgatgttgttgccggtggaccaccttgccaacccttttcattgggtggcaag
caccgtgcagatgaagaccacagggatatgtttccgtttgcaatcaatgcaatcgagcac
ctcatgcctaaagcatttgtattcgagaatgtaaaaggattgttacgcaacagttttgct
gattacttcgaatacattattcttcgcctaacttttcccggctttaaagcagggaaaaat
gatgattggcgcgatcacctgataaaacttcgcaaaatttctttgatgccctacgctggc
gttaggtatgacgttaagtacgagcttatcaatgctgcggattacggcgttcctcaagtt
cgggagcgcgtaataattattggacttcggtccgatttgaatttgaactggtcatttcca
gagccaacgcattcacaagataggcttctttgggatatacatgtttccggtgaatactgg
gagcaacatcgtgtttccgcaaaggaaaaggcgatagtccttgcgtcaacagaaaagatg
gcaaacagaatttattgccgatatgggttgttagagcctgagcatcttccatggaagaca
attcgagatgcggtatcgaatttgccaccaccaaagaccaaacactatttggaagaccat
gcttttagagatggtgctagaacttatgctggacatactggtagcgaatacgactggccg
tcaaagacaatcaaggctggcgatcacggtgtgcccggcggtgaaaatatgattcgcttt
cctgatgactctgttaggtatcttacgattcttgaggcgaaacgacttcaaacatttcct
gatgacttcgtagtaaagggcgcttggggcgaggccatgcgccagcttggcaatgccgtt
ccagtaaagttagccaatattattggcgatcatctttacactctactatctgcaaaaacc
gctcgaaaagtgttaagacggtaa
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