Gamma proteobacterium HdN1: HDN1F_20390
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Entry
HDN1F_20390 CDS
T01300
Name
(GenBank) Isocitrate/isopropylmalate dehydrogenase family protein
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb00020
Citrate cycle (TCA cycle)
gpb00480
Glutathione metabolism
gpb00720
Other carbon fixation pathways
gpb01100
Metabolic pathways
gpb01110
Biosynthesis of secondary metabolites
gpb01120
Microbial metabolism in diverse environments
gpb01200
Carbon metabolism
gpb01210
2-Oxocarboxylic acid metabolism
gpb01230
Biosynthesis of amino acids
gpb04146
Peroxisome
Module
gpb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gpb_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HDN1F_20390
09102 Energy metabolism
00720 Other carbon fixation pathways
HDN1F_20390
09106 Metabolism of other amino acids
00480 Glutathione metabolism
HDN1F_20390
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HDN1F_20390
Enzymes [BR:
gpb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
HDN1F_20390
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Gene cluster
GFIT
Motif
Pfam:
Iso_dh
IDH
PDDEXK_15
Motif
Other DBs
NCBI-ProteinID:
CBL45622
UniProt:
E1VLD0
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All DBs
Position
2531396..2533174
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AA seq
592 aa
AA seq
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MSGTASTLVSTLAGKIAVKSTLVVLHGDEMAQVCLDRILDQFVRKRLDMPLLEMDLSAEN
RLRTNGQIVKDAIAALKTHGVGLKNAGMTVNKAQLEALLAANPDVDGSKLHPLATKSPNG
AIRAGIGGNITREDIPFRNIKRLAPQWVGRDIEVFTMETGGNKDSYNEISRVTGVIKVMF
VGASGNPVELHRRKIKKGDPWLLASNDIYKVRSWAHEFFRRALEEKRDAYLGLKDTVISG
YEGTMRDVIEGVYKNTYQADFEKAGLRYFYELIDAQAARIVATPPERALWGVPENTTGRK
MYKLVNALKKWGIPERQFSVSISRMSAGGGDQYGSFNMPVGEDGIIKVMLDGEEMHAREV
KKGDPIIFMHNDREAIKDWVTQVFRDAARNDKEIYFGLKREYMQYDDVFSDVIREVRQEI
LQFNLQVPSFMVMRPSSQLKKMITDPPRNGLYPALNLDGDVFSDISAALGGSLATASSII
ESKDGTMLYEAPHGTAHDLYVKYQESKGKVVLFNASALLYAVANALETLALRESNEMLRC
YAHHLKTSLIETVAQGYVTADLKGKTIQPEQEKEVDMYGFLDRIEENLRPMA
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaacagcatcaacactagtatcgactttagcaggaaaaatcgcggtaaagagc
accttggtcgttttgcatggcgatgaaatggcgcaggtttgcttggatcgcattcttgat
cagtttgtcaggaaacgccttgatatgccgcttctggaaatggatctttccgcagagaat
cgccttcgaaccaatggccagattgtgaaggatgcgattgcagccttaaaaacacacgga
gttgggcttaagaacgcaggaatgacggtgaataaagctcagttggaggcgctgcttgct
gctaatccagacgtggatggaagtaagttgcacccgcttgccaccaagtcgccaaatgga
gcaattcgtgctggaataggcggcaatatcacccgtgaagacattcctttccgcaatatc
aagcgccttgcgccgcaatgggtgggccgggatattgaagtgttcacgatggagaccggt
gggaacaaagatagctataacgaaatttcccgagtaacgggcgttatcaaggtgatgttt
gtcggagcgagcggcaatcccgtggagctgcatcgccgcaagatcaagaaaggcgatcct
tggctactggcaagtaatgatatctataaggtgcgcagctgggcacatgaattttttcgg
cgcgccttagaagaaaagcgcgacgcctatcttggcctgaaagatacagtgatttcaggt
tacgaaggaacgatgcgtgatgtaattgaaggtgtttataaaaatacctatcaagcagat
tttgagaaggcagggttgcgttatttttatgagctgattgatgcgcaggctgcacgcatt
gtggcgactccaccggaacgagcgctttggggggttccggagaacacgacggggcgcaag
atgtataagcttgtgaatgcccttaaaaagtgggggattccggagcgccagtttagcgtg
tcgatttcgcgcatgagcgctgggggtggcgatcagtatggcagtttcaatatgcctgtc
ggtgaggatggcatcattaaggtgatgttggacggcgaggaaatgcatgctcgcgaggta
aagaaaggcgatcccattatctttatgcataacgaccgtgaggcgataaaagattgggtg
acgcaggtgtttcgtgatgcggcgcgtaatgataaggagatctattttggccttaagcgc
gagtatatgcagtatgacgatgtttttagcgatgtgattcgtgaggtgcgccaagaaatt
ctgcagttcaatttgcaggtgccctcgttcatggtgatgcgcccgtctagccagttgaag
aagatgatcacggacccgccgcgcaatggtttgtaccctgcgctgaacttggatggggat
gttttctcggatatttctgcggctttgggcggcagcctagccacggccagttcgattatc
gaaagtaaggacggcacaatgctgtacgaggcgccgcacggcacggcgcacgacttgtat
gtcaaatatcaggagtcgaagggcaaggtggttctgtttaacgcctctgcgttgctctac
gcggtggccaatgcgctggaaacgcttgcgctgcgggagagcaatgaaatgctgcgctgc
tatgcgcaccacttgaaaacctctctgattgaaacggtcgcacaagggtatgtgacggcg
gatctgaaaggaaaaacaatccagcctgaacaagaaaaggaggtcgatatgtacggtttt
ctggaccgtatagaggaaaatctccggccgatggcgtga
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