Gamma proteobacterium HdN1: HDN1F_23630
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Entry
HDN1F_23630 CDS
T01300
Symbol
priA
Name
(GenBank) Primosomal protein N\'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HDN1F_23630 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpb03400
]
HDN1F_23630 (priA)
Enzymes [BR:
gpb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HDN1F_23630 (priA)
DNA repair and recombination proteins [BR:
gpb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HDN1F_23630 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
PriA-like_WH
AAA_30
Zn_ribbon_6
AAA_19
NACHT
HypA
ETF
ADDB_N
Motif
Other DBs
NCBI-ProteinID:
CBL45946
UniProt:
E1VMA4
LinkDB
All DBs
Position
complement(2904551..2906908)
Genome browser
AA seq
785 aa
AA seq
DB search
MKSLLIYQIAIATPLRRLFDYLPPSHELGALLVQGHRVLVPFGNRKEIGIVVGTTNDSEF
PLEKLKRIERVLDQIPAISADLMDLCRWASRYYHYSPGEVYHHALPTALRNRANPAEETE
ILWRATEKGQVIRLESLSRSTRQQEALQQLRDCPQGMSASMLKHLGIPSAILKALADKQL
VVSNHHTVLDATIAATSAESPTQWLAEPQLSANPEQQAALDAICSHQGFKVWLLEGVTGS
GKTEVYLQAIAHCVQQGHQALVLVPEIGLTPQTIGRFQRRFRVPIAALHSGLSDRERLHA
WRNSKSGKARIIIGTRSAVFAAVPQLGLIVIDEEHDTSFKQQSGFRYHARDVAVMRARQQ
NIPIILGSATPSLESLHNANLCRYETLLLQNRAGNATRPLYQIVDIKAQKLTEGISEPAL
KAATSCLKRGEQVLFFMNRRGYAPVLLCHDCGWHGQCENCDAHLTLHRNPTHLHCHHCSA
HRAVPHFCEACGSSDLRAIGQGTERIEDTLQNLFPEHAIVRIDRDAVRSAERMHQQFGVI
HSGKPALLVGTQMLAKGHHFPNVTLVVILNVDAGLFSGDFRGLEYTAQLIEQVAGRAGRG
DKRGQVLLQTHHPEHPSIKLLVQHGYHALAESLLFERQLVSLPPFSHLAVVRAEAQTPDV
ARDFLRAALAQGNAILLASRPPQSNATQSHATQSYATPSNATPSATNQGPPEQDVPEPED
ELELLGPIPATLGRKSGHYRFQLVLKSQHRPALHRFIQRWLAVVESLAPRTVRWHLDVDP
VQMDD
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccttgctgatctaccaaattgctatcgcaactccgttgcgccgactgtttgac
tatttaccgccctcacacgagctcggcgcattgcttgtgcaaggccatcgcgtgctggtg
ccgtttggcaatcgaaaagaaatcggaatcgtagtaggcaccacaaacgacagcgagttt
ccacttgaaaaactcaagcgcattgagcgggtactggatcaaattccagcaatttccgcc
gacttgatggacttatgccgctgggcaagccgctattaccattattctcctggcgaggtg
taccaccacgcgcttcccaccgcgctccgcaaccgtgcgaaccccgccgaggaaacggaa
atcctttggcgggccaccgaaaaaggccaagtcatccgcttagagtccctaagccgctca
acacgccagcaggaagccttgcaacaactgcgcgactgcccgcaaggaatgagcgccagc
atgctaaagcaccttggcattccttccgccatcctcaaagcactcgcagataaacagctg
gtggtcagcaatcatcacacagttctcgacgccacgattgcagccacgagcgccgaaagc
cctacccaatggctagccgaaccgcagctctctgcaaaccccgaacagcaggcggcgcta
gatgcaatctgcagccaccaagggttcaaagtctggctgctggaaggcgttaccggcagc
ggcaaaaccgaagtctatttacaggccattgcgcattgcgtccagcaaggccaccaagcg
ttagtgctggtgccagaaattgggctcacccctcaaaccattgggcgcttccagcggcgc
tttcgcgtgccgattgcagctttgcactccggtttaagcgatcgcgagcgcttgcatgcg
tggcgtaattcaaaaagcggcaaggcgcgtattattatcggcacaagatctgcagtattt
gcggcagtaccgcaacttggcctaatcgttattgatgaggaacacgacacctcttttaag
cagcaaagcggctttcgctatcacgcacgcgatgtagcggtcatgcgtgcgcgacagcaa
aatattccgattattctgggaagtgcaacgcctagccttgaatctctgcataacgcaaac
ctttgccgatacgagacacttctgttgcaaaaccgcgccggaaacgccacacggccgctc
taccagattgttgacattaaggcgcaaaaattaacggaaggaatttctgaacctgcgcta
aaggcggcaacaagctgtctgaaacgcggtgagcaagtgctgttttttatgaaccggcgt
ggctatgcgcccgtgttgctctgtcatgattgtggatggcatggccagtgcgaaaactgc
gacgcacacttgacgttacaccgaaaccccacccatttgcattgccaccactgtagtgcg
caccgcgccgttccgcatttctgcgaagcctgcggcagcagcgatttacgcgcgattggc
caaggtacggagcgcattgaggataccctgcaaaatctgtttccagagcatgccatcgtg
cgaattgaccgcgatgcagttcgcagcgcagagcgcatgcaccagcaatttggcgttatt
cattctggcaagcctgcgctgttggtcggtacacagatgctggcaaaagggcaccatttt
cctaacgttacgcttgtggtgatactcaatgtggacgcgggattattttccggcgatttt
cgtgggctggaatacacggcacaactcattgaacaggttgcgggccgagcggggcgtggg
gataagcgggggcaggtgttgctacaaacacatcaccctgaacacccttctattaagctt
ctcgttcagcatggctatcacgccttagcagagagcctgctgtttgagcgccaactggtt
tcattgccgccattttcacaccttgccgtagtgcgcgccgaggcgcaaaccccagacgtt
gctcgtgattttttacgtgcagcgctcgcacaaggaaacgccatccttttagcaagccgc
cctcctcaaagcaacgcaacgcaaagtcatgcaacgcaaagctatgcaacgccaagcaac
gcaacgccaagcgccaccaatcaagggccacccgagcaggatgttccagaacctgaagat
gagctcgaactgctcggcccgattcccgccaccctgggccgcaaatccggccactatcgt
tttcaactagtattaaaatcccaacaccggcctgcgctccaccgctttattcagcgctgg
ctggcagtcgtggaatcgctcgcaccaagaactgtgcgctggcatttggatgtagatcct
gtgcagatggatgattga
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