Gamma proteobacterium HdN1: HDN1F_25330
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Entry
HDN1F_25330 CDS
T01300
Symbol
glyA
Name
(GenBank) Serine hydroxymethyltransferase I
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb00260
Glycine, serine and threonine metabolism
gpb00460
Cyanoamino acid metabolism
gpb00630
Glyoxylate and dicarboxylate metabolism
gpb00670
One carbon pool by folate
gpb00680
Methane metabolism
gpb01100
Metabolic pathways
gpb01110
Biosynthesis of secondary metabolites
gpb01120
Microbial metabolism in diverse environments
gpb01200
Carbon metabolism
gpb01230
Biosynthesis of amino acids
gpb01240
Biosynthesis of cofactors
gpb04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HDN1F_25330 (glyA)
09102 Energy metabolism
00680 Methane metabolism
HDN1F_25330 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HDN1F_25330 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HDN1F_25330 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HDN1F_25330 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HDN1F_25330 (glyA)
Enzymes [BR:
gpb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HDN1F_25330 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
CBL46116
UniProt:
E1VMS4
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All DBs
Position
3127523..3128779
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AA seq
418 aa
AA seq
DB search
MFPADMTIAKFDPDLWQAMEGEKRRQEEHIELIASENYASPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVAEQLAIDRVKALFGADYANVQPHSGSQANAAVYTALLEPHDVVLGMS
LAHGGHLTHGAKVNFSGRTYTAVQYGLNPETGEVDYDDVARLAREHKPKMIVAGFSAYSR
VMDWGKFRAIADEVGAYFMVDMAHVAGLVAAGLYPNPTQIADVTTSTTHKTLGGPRGGII
LAKSNPDIEKKLNSAVFPGIQGGPLMHVIAAKAVCFKEAASDAFRTYQTQVVANARAMAE
VVKSRGYDVVSGGTDNHLFLLSLIGREVTGKDADAALGRANITVNKNAVPNDPRSPFVTS
GLRIGTPAVTRRGFGTAEVRDLAGWICDILDNISDEATIERVRKNVLEICAKFPVYAN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtttccagccgacatgacaattgctaaatttgatcccgatctatggcaagccatggag
ggcgagaaacgccgccaagaagagcatattgagctgatcgcctccgaaaactacgcaagc
ccagccgtaatggaagcgcaaggctcggtacttacgaacaagtacgccgaaggctatccc
ggcaaacgctattacggtggctgcgaatacgtagacgtcgcggagcaattggccattgat
cgcgtaaaagcactgttcggcgccgactatgccaacgtgcagccgcactccggctcacag
gcgaacgcagcggtatataccgcgcttctggaaccgcacgatgtcgttctggggatgagc
cttgcccacggtggccacctcactcacggtgccaaagtaaacttttcaggccgtacctat
accgccgtacagtacggtttgaaccctgaaaccggcgaagtcgactacgatgatgtcgcc
cgtctcgctcgcgagcacaagcccaagatgatcgtagccggtttttcggcctactcccgc
gtaatggactggggtaaattccgcgcaattgcagatgaagtaggcgcgtatttcatggta
gacatggcccacgttgccggcctcgtcgcggcaggtctctacccgaaccccacgcagatt
gccgacgtcaccacctcaaccacccacaaaaccttgggcgggccacgcggcggcatcatt
ctggcaaaatcgaatccagatattgagaaaaaactgaactccgccgtattccccggcatt
cagggcggccctttgatgcatgtgattgcagccaaagccgtgtgcttcaaagaagcggca
agtgatgccttccgcacctatcaaacccaagtggttgccaacgcacgtgcaatggccgaa
gtcgtaaaaagtcgtggctacgatgtcgtctccggcggtactgacaaccacctgttcctg
ctaagcctaatcggccgcgaagttaccggcaaagacgccgacgcagccttaggccgcgct
aacatcaccgtgaacaaaaacgcagtgcccaacgatccgcgctccccgttcgtgaccagc
ggcttgcgcattggcacgcctgccgtaacccgtcgtggttttggcaccgctgaagtgcgt
gatctggccggctggatctgcgatattctcgacaatatcagcgatgaagccaccattgag
cgcgtaagaaagaacgtactggaaatctgcgcgaagtttccggtgtacgcaaactaa
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